RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 F5H6K3 240 aa11.5□□□□□ -0.57
MCPH1-203ENST00000519480 KLRC3Q07444 240 aa11.5□□□□□ -0.57
MCPH1-203ENST00000519480 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
MCPH1-203ENST00000519480 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
MCPH1-203ENST00000519480 SAFBQ15424 915 aaKnown RBP eCLIP11.5□□□□□ -0.57
MCPH1-203ENST00000519480 EGFL6Q8IUX8 553 aa11.5□□□□□ -0.57
MCPH1-203ENST00000519480 COA7Q96BR5 231 aa11.5□□□□□ -0.57
MCPH1-203ENST00000519480 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
MCPH1-203ENST00000519480 ADM5C9JUS6 153 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 NDUFB10O96000 172 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 MARCKSP29966 332 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-203ENST00000519480 CAP2P40123 477 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 ZNF543Q08ER8 600 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 AXDND1Q5T1B0 1012 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-203ENST00000519480 ZKSCAN4Q969J2 545 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-203ENST00000519480 TMEM63CQ9P1W3 806 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 WNT7AO00755 349 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 GNAQP50148 359 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 KLHL40Q2TBA0 621 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 ADGRF4Q8IZF3 695 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 PHF20Q9BVI0 1012 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-203ENST00000519480 SMCHD1A6NHR9 2005 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 PHF20L1A8MW92 1017 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 NT5C2P49902 561 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 NPY5RQ15761 445 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 EAPPQ56P03 285 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-203ENST00000519480 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
MCPH1-203ENST00000519480 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 XBP1P17861 261 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 LIG1P18858 919 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 ME1P48163 572 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 RRP36Q96EU6 259 aaKnown RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 MAP3K14Q99558 947 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 SCAND2PQ9GZW5 306 aaPredicted RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 CFAP45Q9UL16 551 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 U2AF2P26368 475 aaKnown RBP eCLIP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 KRT2P35908 639 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 TOB1P50616 345 aaPredicted RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 STK38Q15208 465 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 ASPRV1Q53RT3 343 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 TMEM87AQ8NBN3 555 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
MCPH1-203ENST00000519480 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
MCPH1-203ENST00000519480 STXBP3O00186 592 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 NAPAP54920 295 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 UBE2HP62256 183 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 SKOR2Q2VWA4 1001 aaPredicted RBP11.47□□□□□ -0.57
MCPH1-203ENST00000519480 FAM83BQ5T0W9 1011 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 WRNIP1Q96S55 665 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 SPZ1Q9BXG8 430 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 ATAD5Q96QE3 1844 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
MCPH1-203ENST00000519480 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 MKL1Q969V6 931 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 FEZ1Q99689 392 aa11.47□□□□□ -0.57
MCPH1-203ENST00000519480 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
MCPH1-203ENST00000519480 TBC1D12O60347 775 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 GSE1Q14687 1217 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 APOBEC3FQ8IUX4 373 aaKnown RBP11.46□□□□□ -0.57
MCPH1-203ENST00000519480 EXOC8Q8IYI6 725 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 RIOX1Q9H6W3 641 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 ARHGEF10LQ9HCE6 1279 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 LINC00301Q8NCQ3 95 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 LZTS2Q9BRK4 669 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 BARHL2Q9NY43 387 aa11.46□□□□□ -0.57
MCPH1-203ENST00000519480 BMP3P12645 472 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 CAMK4Q16566 473 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 USH1GQ495M9 461 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 SPECC1Q5M775 1068 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 MOB2Q70IA6 237 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 CLIC6Q96NY7 704 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.58
MCPH1-203ENST00000519480 TMEM260Q9NX78 707 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.58
MCPH1-203ENST00000519480 SYCE3A1L190 88 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 SMCO2A6NFE2 343 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 ASNSP08243 561 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 EPHX2P34913 555 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 FMR1Q06787 632 aaKnown RBP eCLIP11.45□□□□□ -0.58
MCPH1-203ENST00000519480 ZNF174Q15697 407 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
MCPH1-203ENST00000519480 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms