RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 SYCP1Q15431 976 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 USP48Q86UV5 1035 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 NDUFAF2Q8N183 169 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ISCA1Q9BUE6 129 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 CD93Q9NPY3 652 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 INIPQ9NRY2 104 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 DDX56Q9NY93 547 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RFX7Q2KHR2 1363 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 DIAPH1O60610 1272 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 RFC4P35249 363 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 GBE1Q04446 702 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 LSMEM2Q8N112 164 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 GMLQ99445 158 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 OXCT2Q9BYC2 517 aaPredicted RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 NYXQ9GZU5 481 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 TMEM165Q9HC07 324 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 IVNS1ABPQ9Y6Y0 642 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 POLR2AP24928 1970 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 UBN2Q6ZU65 1347 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 PDCD2Q16342 344 aaPredicted RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 C10orf62Q5T681 223 aaPredicted RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 DNAJC10Q8IXB1 793 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 ARRDC4Q8NCT1 418 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 OR8K1Q8NGG5 319 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 VMP1Q96GC9 406 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 GTF3C4Q9UKN8 822 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 M0QX08 132 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 SNUPNO95149 360 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 STARD3NLO95772 234 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 FBLN1P23142 703 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 RPIAP49247 311 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 COX10Q12887 443 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 USPL1Q5W0Q7 1092 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 TTLL7Q6ZT98 887 aa6.07□□□□□ -1.44
AP3B1-204ENST00000519295 RBM18Q96H35 190 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 NAF1Q96HR8 494 aaKnown RBP6.07□□□□□ -1.44
AP3B1-204ENST00000519295 PTPRCP08575 1304 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 RLFQ13129 1914 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 SPDYE4A6NLX3 237 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 SASH1O94885 1247 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 EGFRP00533 1210 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 SNRPA1P09661 255 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 SCNN1DP51172 638 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 NEK10Q6ZWH5 1172 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 SP8Q8IXZ3 490 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 KIF18AQ8NI77 898 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 EZH1Q92800 747 aaPredicted RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 GRPEL1Q9HAV7 217 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 ISY1Q9ULR0 285 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 MED23Q9ULK4 1368 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 E2F6O75461 281 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 RPS6KA5O75582 802 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 RPN1P04843 607 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 PTPN5P54829 565 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 RBL2Q08999 1139 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 CRY1Q16526 586 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 FAM171BQ6P995 826 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 ZCCHC17Q9NP64 241 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 UTYO14607 1347 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 TNRC18O15417 2968 aaPredicted RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 A0A0G2JLW4 131 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 HMMRO75330 724 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 TNNT1P13805 278 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 GPC3P51654 580 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 TAGLNQ01995 201 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 NCBP1Q09161 790 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 TRIM71Q2Q1W2 868 aaKnown RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 B4GALNT3Q6L9W6 998 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 CCDC174Q6PII3 467 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 RNF25Q96BH1 459 aaPredicted RBP6.06□□□□□ -1.44
AP3B1-204ENST00000519295 GMCL1Q96IK5 515 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 FAM20AQ96MK3 541 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 TSGA10Q9BZW7 698 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 NMRK2Q9NPI5 230 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 USP20Q9Y2K6 914 aa6.06□□□□□ -1.44
AP3B1-204ENST00000519295 PPP2R1AP30153 589 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 COL4A6Q14031 1691 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 CCDC92Q53HC0 331 aaPredicted RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 C1orf141Q5JVX7 400 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 OXER1Q8TDS5 423 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 ZNF541Q9H0D2 1346 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 A0A1B0GUL7 405 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 H0YHG0 523 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 SARNPP82979 210 aaKnown RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 INO80DQ53TQ3 878 aaPredicted RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 GIGYF2Q6Y7W6 1299 aaKnown RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 CCDC129Q6ZRS4 1044 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 CCDC91Q7Z6B0 441 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 FMNL3Q8IVF7 1028 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 EXOC4Q96A65 974 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 CFAP53Q96M91 514 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 ST7Q9NRC1 585 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 POLG2Q9UHN1 485 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
AP3B1-204ENST00000519295 NCAM1P13591 858 aa6.05□□□□□ -1.44
AP3B1-204ENST00000519295 RAC2P15153 192 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms