RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 MOGSQ13724 837 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 TMTC3Q6ZXV5 915 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 RASAL3Q86YV0 1011 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 MS4A4AQ96JQ5 239 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 MYL10Q9BUA6 226 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 TMOD4Q9NZQ9 345 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 CETPP11597 493 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 VCAM1P19320 739 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 ZNF157P51786 506 aaPredicted RBP13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 HMGCS2P54868 508 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 INHBEP58166 350 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 STAG2Q8N3U4 1231 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 SLC45A1Q9Y2W3 748 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 MYPNQ86TC9 1320 aa13.3□□□□□ -0.28
ARFGEF1-202ENST00000517955 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 KLRF2D3W0D1 207 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 CDKL5O76039 1030 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 FDX1P10109 184 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 RXRAP19793 462 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 CCT2P78371 535 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 STK3Q13188 491 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 NOL8Q76FK4 1167 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 NBPF11Q86T75 865 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 RGS22Q8NE09 1264 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 ZCCHC17Q9NP64 241 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 ABT1Q9ULW3 272 aaKnown RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 NAP1L2Q9ULW6 460 aaPredicted RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
ARFGEF1-202ENST00000517955 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 CPLX1O14810 134 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 STAT2P52630 851 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 FAM83BQ5T0W9 1011 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 RLFQ13129 1914 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 STK36Q9NRP7 1315 aa13.28□□□□□ -0.28
ARFGEF1-202ENST00000517955 PARP14Q460N5 1801 aa13.27□□□□□ -0.28
ARFGEF1-202ENST00000517955 TMEM232C9JQI7 657 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 CYTH3O43739 400 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 HMGN5P82970 282 aaKnown RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 COG2Q14746 738 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 LBX2Q6XYB7 198 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 RAB11FIP4Q86YS3 637 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 PRPF38AQ8NAV1 312 aaKnown RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 RPAP3Q9H6T3 665 aaPredicted RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 HOXC10Q9NYD6 342 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
ARFGEF1-202ENST00000517955 GOLGA8HP0CJ92 632 aa13.26□□□□□ -0.29
ARFGEF1-202ENST00000517955 TM4SF4P48230 202 aa13.26□□□□□ -0.29
ARFGEF1-202ENST00000517955 SYDE2Q5VT97 1194 aa13.26□□□□□ -0.29
ARFGEF1-202ENST00000517955 FRMPD2Q68DX3 1309 aaPredicted RBP13.26□□□□□ -0.29
ARFGEF1-202ENST00000517955 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
ARFGEF1-202ENST00000517955 ADGRF4Q8IZF3 695 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms