RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 CATSPERGQ6ZRH7 1159 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 BRI3BPQ8WY22 251 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 ZIC5Q96T25 663 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 MYL10Q9BUA6 226 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 TANGO6Q9C0B7 1094 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 RPAP3Q9H6T3 665 aaPredicted RBP8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 PNMA2Q9UL42 364 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 MYPNQ86TC9 1320 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 FLOT1O75955 427 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 GOLGA8HP0CJ92 632 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 RXRAP19793 462 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 ANP32AP39687 249 aaKnown RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 CCT2P78371 535 aaKnown RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 IRX3P78415 501 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 AKAP17AQ02040 695 aaKnown RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 TRAF1Q13077 416 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 STK3Q13188 491 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 MOGSQ13724 837 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 ME3Q16798 604 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 KIAA1755Q5JYT7 1200 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 SYDE2Q5VT97 1194 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 GPAT2Q6NUI2 795 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 NOL8Q76FK4 1167 aaKnown RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 CCDC144CPQ8IYA2 1237 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 GTF3C2Q8WUA4 911 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 TMX3Q96JJ7 454 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 SLF1Q9BQI6 1058 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 MAD2L2Q9UI95 211 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 CTDP1Q9Y5B0 961 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 NID2Q14112 1375 aa8.21□□□□□ -1.1
SCARNA6-201ENST00000515982 BTBD19C9JJ37 291 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PDHXO00330 501 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 ZBED4O75132 1171 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 IFNAR1P17181 557 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 DSG3P32926 999 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 GCLCP48506 637 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 SSRP1Q08945 709 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 SCRN1Q12765 414 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 TREML2Q5T2D2 321 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 RAB11FIP4Q86YS3 637 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 IFNL1Q8IU54 200 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 SRBD1Q8N5C6 995 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 MB21D1Q8N884 522 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 GTF3C6Q969F1 213 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 KIFC2Q96AC6 838 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PARK7Q99497 189 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PTPN18Q99952 460 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 SPZ1Q9BXG8 430 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 UBA5Q9GZZ9 404 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 ASCC2Q9H1I8 757 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 RIOX1Q9H6W3 641 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 ZFYVE28Q9HCC9 887 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 VAT1LQ9HCJ6 419 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PRR12Q9ULL5 1215 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PTPRFP10586 1907 aa8.2□□□□□ -1.1
SCARNA6-201ENST00000515982 PRPF3O43395 683 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 CDC27P30260 824 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 SLC16A2P36021 539 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 OAZ1P54368 228 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 HMGN5P82970 282 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 LBX2Q6XYB7 198 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 CCDC83Q8IWF9 413 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 ADGRF4Q8IZF3 695 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 FAM43AQ8N2R8 423 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 WASF1Q92558 559 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 RRP36Q96EU6 259 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 NCOA5Q9HCD5 579 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 SEC63Q9UGP8 760 aaKnown RBP8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 RABGAP1Q9Y3P9 1069 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
SCARNA6-201ENST00000515982 LOC285556D6RIA3 1793 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 VWA5AO00534 786 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 PLEKHA8P1O95397 391 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms