RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 CCDC184Q52MB2 194 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
RFC1-213ENST00000512275 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
RFC1-213ENST00000512275 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 HDXQ7Z353 690 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 NME9Q86XW9 330 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 TAB3Q8N5C8 712 aaPredicted RBP9.3□□□□□ -0.92
RFC1-213ENST00000512275 TMEM40Q8WWA1 233 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
RFC1-213ENST00000512275 TNNT2P45379 298 aaPredicted RBP9.29□□□□□ -0.92
RFC1-213ENST00000512275 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
RFC1-213ENST00000512275 RING1Q06587 406 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 PDE3AQ14432 1141 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 TCEAL1Q15170 157 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 CD163Q86VB7 1156 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 MORC1Q86VD1 984 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 MICAL1Q8TDZ2 1067 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 RNPC3Q96LT9 517 aaKnown RBP9.29□□□□□ -0.92
RFC1-213ENST00000512275 TM9SF2Q99805 663 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 WDR18Q9BV38 432 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 REV1Q9UBZ9 1251 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 NHSL1Q5SYE7 1610 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 TTC21BQ7Z4L5 1316 aa9.29□□□□□ -0.92
RFC1-213ENST00000512275 ENPP3O14638 875 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 FYB1O15117 783 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
RFC1-213ENST00000512275 FURINP09958 794 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 CD68P34810 354 aaPredicted RBP9.28□□□□□ -0.92
RFC1-213ENST00000512275 TMEM201Q5SNT2 666 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
RFC1-213ENST00000512275 DMRTC2Q8IXT2 367 aaPredicted RBP9.28□□□□□ -0.92
RFC1-213ENST00000512275 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 KCNK4Q9NYG8 393 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 GMIPQ9P107 970 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 ROBO1Q9Y6N7 1651 aa9.28□□□□□ -0.92
RFC1-213ENST00000512275 LTN1O94822 1766 aa9.27□□□□□ -0.92
RFC1-213ENST00000512275 SHPRHQ149N8 1683 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 A0A1W2PQH9 124 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 DNAJA2O60884 412 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 GUCY2CP25092 1073 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 CHRNA4P43681 627 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 RASGRF1Q13972 1273 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 FXNQ16595 210 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 ELMO3Q96BJ8 720 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 TRIM11Q96F44 468 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
RFC1-213ENST00000512275 KRTAP4-8Q9BYQ9 185 aa9.27□□□□□ -0.93
RFC1-213ENST00000512275 OVOS2A0A0J9YW53 1432 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 OVOS2Q6IE36 1432 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 DCDC2CA8MYV0 355 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 AOC2O75106 756 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 HMGB1P09429 215 aaKnown RBP9.26□□□□□ -0.93
RFC1-213ENST00000512275 HSD3B2P26439 372 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 OVOS1Q6IE37 1185 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 TTC6Q86TZ1 520 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
RFC1-213ENST00000512275 ST7Q9NRC1 585 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 ADAM30Q9UKF2 790 aa9.26□□□□□ -0.93
RFC1-213ENST00000512275 BRD4O60885 1362 aaPredicted RBP9.25□□□□□ -0.93
RFC1-213ENST00000512275 PHRF1Q9P1Y6 1649 aaKnown RBP9.25□□□□□ -0.93
RFC1-213ENST00000512275 ANKRD62A6NC57 917 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 ACRP10323 421 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 PLCG1P19174 1290 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 ERVK-24P63145 666 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 PDE4BQ07343 736 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 CDCP2Q5VXM1 449 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 LARP1BQ659C4 914 aaKnown RBP9.25□□□□□ -0.93
RFC1-213ENST00000512275 ATG4CQ96DT6 458 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 PLVAPQ9BX97 442 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 PXDNQ92626 1479 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 PEAK1Q9H792 1746 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
RFC1-213ENST00000512275 CCDC85CA6NKD9 419 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 SLC22A31A6NKX4 558 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 DLL1O00548 723 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 PDPK1O15530 556 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 GJB6O95452 261 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
RFC1-213ENST00000512275 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 COG3Q96JB2 828 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 CNNM2Q9H8M5 875 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 HIF3AQ9Y2N7 669 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 ABCA3Q99758 1704 aa9.24□□□□□ -0.93
RFC1-213ENST00000512275 PHLPP1O60346 1717 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 PRAMEF27A3QJZ7 478 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 TNFRSF10CO14798 259 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
RFC1-213ENST00000512275 NME1P15531 152 aaKnown RBP9.23□□□□□ -0.93
RFC1-213ENST00000512275 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms