RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 KRT23Q9C075 422 aa25.14■■□□□ 1.62
UBE2D3-229ENST00000510129 ZNF214Q9UL59 606 aaPredicted RBP25.14■■□□□ 1.62
UBE2D3-229ENST00000510129 NMT2O60551 498 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 PRKAR2AP13861 404 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 ADORA2AP29274 412 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 KCTD2Q14681 263 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 REPS2Q8NFH8 660 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 NBPF3Q9H094 633 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 ISY1Q9ULR0 285 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 TACC3Q9Y6A5 838 aa25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 COL11A1P12107 1806 aaPredicted RBP25.13■■□□□ 1.61
UBE2D3-229ENST00000510129 IKQ13123 557 aaPredicted RBP25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 DGKHQ86XP1 1220 aa25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 KIFC2Q96AC6 838 aa25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 CCDC136Q96JN2 1154 aa25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 DEFB118Q96PH6 123 aa25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 SLC38A10Q9HBR0 1119 aa25.12■■□□□ 1.61
UBE2D3-229ENST00000510129 TMEM232C9JQI7 657 aa25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 TFRCP02786 760 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 MCCP23508 829 aa25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 OLFML2BQ68BL8 750 aa25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 SNRNP48Q6IEG0 339 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 MMP19Q99542 508 aa25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 FBXO40Q9UH90 709 aa25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 U3KPZ7 1027 aaPredicted RBP25.11■■□□□ 1.61
UBE2D3-229ENST00000510129 ANKLE1Q8NAG6 615 aa25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 SHISA4Q96DD7 197 aa25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 TMEM47Q9BQJ4 181 aa25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 CRISPLD2Q9H0B8 497 aa25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 DIS3Q9Y2L1 958 aaKnown RBP25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 NEDD4P46934 1319 aa25.1■■□□□ 1.61
UBE2D3-229ENST00000510129 SGSM2O43147 1006 aa25.09■■□□□ 1.61
UBE2D3-229ENST00000510129 CACNB2Q08289 660 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-229ENST00000510129 CCL14Q16627 93 aa25.09■■□□□ 1.61
UBE2D3-229ENST00000510129 BMP2KLQ5H9B9 411 aa25.09■■□□□ 1.61
UBE2D3-229ENST00000510129 MSCO60682 206 aa25.08■■□□□ 1.61
UBE2D3-229ENST00000510129 TRDNQ13061 729 aa25.08■■□□□ 1.61
UBE2D3-229ENST00000510129 KIAA1211Q6ZU35 1233 aa25.08■■□□□ 1.61
UBE2D3-229ENST00000510129 CHST13Q8NET6 341 aa25.08■■□□□ 1.61
UBE2D3-229ENST00000510129 PNMA2Q9UL42 364 aa25.08■■□□□ 1.61
UBE2D3-229ENST00000510129 KDM4AO75164 1064 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 FARP2O94887 1054 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 TRIM32Q13049 653 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 CCDC96Q2M329 555 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 TKFCQ3LXA3 575 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 CPXCR1Q8N123 301 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 NPLOC4Q8TAT6 608 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 IL25Q9H293 177 aa25.07■■□□□ 1.6
UBE2D3-229ENST00000510129 ZSCAN10Q96SZ4 725 aaPredicted RBP25.06■■□□□ 1.6
UBE2D3-229ENST00000510129 UBAC1Q9BSL1 405 aa25.06■■□□□ 1.6
UBE2D3-229ENST00000510129 HTATIP2Q9BUP3 242 aa25.06■■□□□ 1.6
UBE2D3-229ENST00000510129 NRBP1Q9UHY1 535 aa25.06■■□□□ 1.6
UBE2D3-229ENST00000510129 B4E1Z4 1266 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 CASC1Q6TDU7 716 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 BTNL9Q6UXG8 535 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 KCTD1Q719H9 257 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 MSL3Q8N5Y2 521 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 ANKS1AQ92625 1134 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 RAVER2Q9HCJ3 691 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 FLRT1Q9NZU1 646 aa25.05■■□□□ 1.6
UBE2D3-229ENST00000510129 COBLO75128 1261 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 IGHA2P01877 340 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 GPATCH4Q5T3I0 446 aaKnown RBP25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 PRPF38BQ5VTL8 546 aaKnown RBP25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 UBE2Q1Q7Z7E8 422 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 DDX11Q96FC9 970 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 MAML3Q96JK9 1138 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 KAT14Q9H8E8 782 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 ZSWIM5Q9P217 1185 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 OGDHLQ9ULD0 1010 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 PRR12Q9ULL5 1215 aa25.04■■□□□ 1.6
UBE2D3-229ENST00000510129 PDHBP11177 359 aa25.03■■□□□ 1.6
UBE2D3-229ENST00000510129 MAP4K1Q92918 833 aa25.03■■□□□ 1.6
UBE2D3-229ENST00000510129 MTMR7Q9Y216 660 aa25.03■■□□□ 1.6
UBE2D3-229ENST00000510129 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
UBE2D3-229ENST00000510129 SNHG28P0DPA3 235 aa25.02■■□□□ 1.6
UBE2D3-229ENST00000510129 PTH1RQ03431 593 aa25.02■■□□□ 1.6
UBE2D3-229ENST00000510129 ACAD9Q9H845 621 aa25.02■■□□□ 1.6
UBE2D3-229ENST00000510129 RIPK3Q9Y572 518 aa25.02■■□□□ 1.6
UBE2D3-229ENST00000510129 CYP2C19P33261 490 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 SLC4A3P48751 1232 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ZNF543Q08ER8 600 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ZNF792Q3KQV3 632 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ERICH6BQ5W0A0 696 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 NECAB2Q7Z6G3 386 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 RALYLQ86SE5 291 aaKnown RBP25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ANKRD35Q8N283 1001 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 PNMA1Q8ND90 353 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ZKSCAN3Q9BRR0 538 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 TNKSO95271 1327 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 CENPFP49454 3210 aa25.01■■□□□ 1.59
UBE2D3-229ENST00000510129 ZNFX1Q9P2E3 1918 aaKnown RBP25■■□□□ 1.59
UBE2D3-229ENST00000510129 CYP21A2P08686 494 aa25■■□□□ 1.59
UBE2D3-229ENST00000510129 CYBAP13498 195 aa25■■□□□ 1.59
UBE2D3-229ENST00000510129 CNGA1P29973 690 aa25■■□□□ 1.59
UBE2D3-229ENST00000510129 CCND3P30281 292 aaPredicted RBP25■■□□□ 1.59
UBE2D3-229ENST00000510129 SART3Q15020 963 aaKnown RBP25■■□□□ 1.59
UBE2D3-229ENST00000510129 SYDE2Q5VT97 1194 aa25■■□□□ 1.59
UBE2D3-229ENST00000510129 ZNF467Q7Z7K2 595 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms