RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 DCAF15Q66K64 600 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 UNC5AQ6ZN44 842 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 CCDC144CPQ8IYA2 1237 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 USHBP1Q8N6Y0 703 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 ZNF655Q8N720 491 aaPredicted RBP5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 POU5F2Q8N7G0 328 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 ABHD4Q8TB40 342 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 MYLIPQ8WY64 445 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 CRBNQ96SW2 442 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 C19orf44Q9H6X5 657 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 SP110Q9HB58 689 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 CHST7Q9NS84 486 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 EBF1Q9UH73 591 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 TCFL5Q9UL49 500 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 NESP48681 1621 aa5.98□□□□□ -1.45
PDLIM1P4-201ENST00000504327 TMEM82A0PJX8 343 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 ANKRD62A6NC57 917 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 SYPP08247 313 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 MLANAQ16655 118 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 MPZL3Q6UWV2 235 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 ZPBP2Q6X784 338 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 RNF111Q6ZNA4 994 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 WAPLQ7Z5K2 1190 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 PDZD8Q8NEN9 1154 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 DHX38Q92620 1227 aaKnown RBP5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 SYTL4Q96C24 671 aaPredicted RBP5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 G6PC3Q9BUM1 346 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 SRRTQ9BXP5 876 aaKnown RBP5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 RNF32Q9H0A6 362 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 PPP1R1BQ9UD71 204 aaPredicted RBP5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 INPP5FQ9Y2H2 1132 aa5.97□□□□□ -1.45
PDLIM1P4-201ENST00000504327 TP53P04637 393 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ERCC5P28715 1186 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CTSKP43235 329 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 GIPRP48546 466 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PCBP3P57721 371 aaKnown RBP5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CRTC3Q6UUV7 619 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PRR23BQ6ZRT6 265 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 C7orf61Q8IZ16 206 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 FAM9AQ8IZU1 332 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF281Q9Y2X9 895 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LTBP3Q9NS15 1303 aa5.96□□□□□ -1.46
PDLIM1P4-201ENST00000504327 SSU72P8A0A1W2PR75 194 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 FITM1A5D6W6 292 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 USP2O75604 605 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 DUSP4Q13115 394 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 OXR1Q8N573 874 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LINC00116Q8NCU8 138 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 SMARCC1Q92922 1105 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 SHDQ96IW2 340 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 DSCC1Q9BVC3 393 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 HIRIP3Q9BW71 556 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZMYM5Q9UJ78 669 aa5.95□□□□□ -1.46
PDLIM1P4-201ENST00000504327 FARP2O94887 1054 aaPredicted RBP5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 EFEMP2O95967 443 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 C8AP07357 584 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 GALK1P51570 392 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CERS3Q8IU89 383 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ANKS4BQ8N8V4 417 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CPLX3Q8WVH0 158 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LINC01599Q8WXQ3 324 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 MAP6Q96JE9 813 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 GPR160Q9UJ42 338 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF214Q9UL59 606 aaPredicted RBP5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PCDHB10Q9UN67 800 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CCDC88BA6NC98 1476 aa5.94□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LAMC3Q9Y6N6 1575 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 A0A1W2PQH9 124 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 H0Y8X5 98 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CHRNEQ04844 493 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 MESP2Q0VG99 397 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 NR0B2Q15466 257 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF124Q15973 351 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PPP2R5EQ16537 467 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 NAALADL2Q58DX5 795 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LILRA2Q8N149 483 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 FAM169BQ8N8A8 192 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 C19orf47Q8N9M1 422 aaKnown RBP5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 OR6P1Q8NGX9 317 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 BRF1Q92994 677 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 SEC16BQ96JE7 1060 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 HHIPL1Q96JK4 782 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 NSUN3Q9H649 340 aaKnown RBP5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 KCNK12Q9HB15 430 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF451Q9Y4E5 1061 aa5.93□□□□□ -1.46
PDLIM1P4-201ENST00000504327 NOTOA8MTQ0 251 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CBFA2T2O43439 604 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 PSPNO60542 156 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF205O95201 554 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 CD247P20963 164 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 BMP8BP34820 402 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 ZNF445P59923 1031 aa5.92□□□□□ -1.46
PDLIM1P4-201ENST00000504327 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms