RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ADGRF4Q8IZF3 695 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SLC26A6Q9BXS9 759 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SMC3Q9UQE7 1217 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 V9GY48 417 aaPredicted RBP23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 CNTNAP5Q8WYK1 1306 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 CATSPERGQ6ZRH7 1159 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 FAM155AB1AL88 458 aaPredicted RBP23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L15C9J2P7 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L13C9JLJ4 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L11C9JVI0 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L18D6R9N7 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L22D6RA61 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L17D6RBQ6 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L19D6RCP7 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L20D6RJB6 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 USP17L24Q0WX57 530 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 SYDE2Q5VT97 1194 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 FAM160B2Q86V87 743 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 TRIM22Q8IYM9 498 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 PIBF1Q8WXW3 757 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 RNF26Q9BY78 433 aaPredicted RBP23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 PRR12Q9ULL5 1215 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 AGTPBP1Q9UPW5 1226 aa23.66■■□□□ 1.38
CDC42SE2-206ENST00000503291 CCL15-CCL14A0A0B4J2E2 113 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 hCG_1642624A0A1W2PR95 340 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 FLOT1O75955 427 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 FDPSP14324 419 aaKnown RBP23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 CCL15Q16663 113 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 SAMD1Q6SPF0 538 aaPredicted RBP23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 PAXIP1Q6ZW49 1069 aaPredicted RBP23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 JMJD4Q9H9V9 463 aa23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 ORC3Q9UBD5 711 aaPredicted RBP23.65■■□□□ 1.38
CDC42SE2-206ENST00000503291 LOC285556D6RIA3 1793 aa23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 PRPF3O43395 683 aaKnown RBP23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 GJB2P29033 226 aa23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 HOXA7P31268 230 aaPredicted RBP23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 HMGN5P82970 282 aaKnown RBP23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 DEFB115Q30KQ5 88 aa23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 GPAT2Q6NUI2 795 aa23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 PRPF38AQ8NAV1 312 aaKnown RBP23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 BRI3BPQ8WY22 251 aa23.64■■□□□ 1.38
CDC42SE2-206ENST00000503291 RASSF10A6NK89 507 aa23.64■■□□□ 1.37
CDC42SE2-206ENST00000503291 AKAP17AQ02040 695 aaKnown RBP23.64■■□□□ 1.37
CDC42SE2-206ENST00000503291 CYP4F22Q6NT55 531 aa23.64■■□□□ 1.37
CDC42SE2-206ENST00000503291 SLF1Q9BQI6 1058 aa23.64■■□□□ 1.37
CDC42SE2-206ENST00000503291 COG2Q14746 738 aa23.63■■□□□ 1.37
CDC42SE2-206ENST00000503291 HOMER1Q86YM7 354 aa23.63■■□□□ 1.37
CDC42SE2-206ENST00000503291 PIGSQ96S52 555 aa23.63■■□□□ 1.37
CDC42SE2-206ENST00000503291 GRM1Q13255 1194 aa23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 RRP36Q96EU6 259 aaKnown RBP23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 PPP1R9AQ9ULJ8 1098 aa23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 STK36Q9NRP7 1315 aa23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 MANSC4A6NHS7 340 aaPredicted RBP23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 MTMR8Q96EF0 704 aa23.62■■□□□ 1.37
CDC42SE2-206ENST00000503291 TESPA1A2RU30 521 aaPredicted RBP23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 BTBD19C9JJ37 291 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 DEXIO95424 95 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 SNAP25P60880 206 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 PKN1Q16512 942 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 FAM184AQ8NB25 1140 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 PTPN18Q99952 460 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 HOXC10Q9NYD6 342 aa23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 RBM27Q9P2N5 1060 aaKnown RBP23.61■■□□□ 1.37
CDC42SE2-206ENST00000503291 DSG3P32926 999 aa23.6■■□□□ 1.37
CDC42SE2-206ENST00000503291 PABPC4Q13310 644 aaKnown RBP eCLIP23.6■■□□□ 1.37
CDC42SE2-206ENST00000503291 SEC63Q9UGP8 760 aaKnown RBP23.6■■□□□ 1.37
CDC42SE2-206ENST00000503291 ASCC2Q9H1I8 757 aaPredicted RBP23.6■■□□□ 1.37
CDC42SE2-206ENST00000503291 ZBTB5O15062 677 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 IRX3P78415 501 aaPredicted RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 HTRA3P83110 453 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 CDC37Q16543 378 aaPredicted RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 PFKFB3Q16875 520 aaPredicted RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 ANKRD23Q86SG2 305 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 ATG4CQ96DT6 458 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 AIFM3Q96NN9 605 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 RANBP17Q9H2T7 1088 aaKnown RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 CWC22Q9HCG8 908 aaKnown RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 RLFQ13129 1914 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 PNMA6FA0A0J9YX94 578 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 PDHXO00330 501 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 SCG2P13521 617 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 INHBEP58166 350 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 CAPNS2Q96L46 248 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 ZIC5Q96T25 663 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 P2RX7Q99572 595 aaKnown RBP23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 ADAMTS5Q9UNA0 930 aa23.59■■□□□ 1.37
CDC42SE2-206ENST00000503291 PARP14Q460N5 1801 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 OSBPP22059 807 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 QRICH1Q2TAL8 776 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 FAM43AQ8N2R8 423 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 WASF1Q92558 559 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 ALG1Q9BT22 464 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 SLC45A1Q9Y2W3 748 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 KIF3AQ9Y496 699 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 MYH6P13533 1939 aa23.58■■□□□ 1.37
CDC42SE2-206ENST00000503291 MYPNQ86TC9 1320 aa23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 VWA5AO00534 786 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms