RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 EEF1GP26641 437 aaKnown RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ADCY7P51828 1080 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 PSMD2Q13200 908 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ZNF658Q5TYW1 1059 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 C10orf67Q8IYJ2 551 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 PANX2Q96RD6 677 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 BAG1Q99933 345 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 GBP3Q9H0R5 595 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 MYO1AQ9UBC5 1043 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 MAN1B1Q9UKM7 699 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 LAMA4Q16363 1823 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 H0YIN7 160 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 NPM3O75607 178 aaKnown RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 TTLL1O95922 423 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PNOCQ13519 176 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 LONRF3Q496Y0 759 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 CCAR2Q8N163 923 aaKnown RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 MYCBPQ99417 103 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 BCL2L12Q9HB09 334 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 CNTNAP5Q8WYK1 1306 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 LOC102724159A0A0B4J2E5 919 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 N4BP3O15049 544 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 OR52Z1P0C646 297 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 CASQ1P31415 396 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 MCM7P33993 719 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 CDK8P49336 464 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 KRT83P78385 493 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PWP2Q15269 919 aaKnown RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 SV2BQ7L1I2 683 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 NUCKS1Q9H1E3 243 aaKnown RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 RSPH14Q9UHP6 348 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 TCHHQ07283 1943 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PRDX5P30044 214 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 CREBRFQ8IUR6 639 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 RABGAP1Q9Y3P9 1069 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PCDHB6Q9Y5E3 794 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PHLPP2Q6ZVD8 1323 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 PRDM1O75626 825 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 STXBP4Q6ZWJ1 553 aa8.32□□□□□ -1.08
PDGFC-203ENST00000502773 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 C16orf45Q96MC5 204 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 FTOQ9C0B1 505 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDGFC-203ENST00000502773 ITIH6Q6UXX5 1313 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 AKAP11Q9UKA4 1901 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 SMCO2A6NFE2 343 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 GNA14O95837 355 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 PDIA5Q14554 519 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 DCAF4Q8WV16 495 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 UBXN4Q92575 508 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 PAGE5Q96GU1 130 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 EHD4Q9H223 541 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 THAP9Q9H5L6 903 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 ERLIN1O75477 346 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 RDXP35241 583 aaKnown RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 CYLC1P35663 651 aaPredicted RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 SLFN12Q8IYM2 578 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 DRC1Q96MC2 740 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 VPS33BQ9H267 617 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 BCORQ6W2J9 1755 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 GAKO14976 1311 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 PLSCR1O15162 318 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 ARHGAP29Q52LW3 1261 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 HAUS3Q68CZ6 603 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 STYK1Q6J9G0 422 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 TBC1D16Q8TBP0 767 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 TSC1Q92574 1164 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 AIFM3Q96NN9 605 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 CLIC6Q96NY7 704 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.31□□□□□ -1.08
PDGFC-203ENST00000502773 ZMYND12Q9H0C1 365 aa8.31□□□□□ -1.08
PDGFC-203ENST00000502773 DOCK2Q92608 1830 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PVALEFA0A1B0GWK0 134 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 AFMP43652 599 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 DNM2P50570 870 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 GPSM2P81274 684 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 CCDC96Q2M329 555 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 CYP26C1Q6V0L0 522 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 SRBD1Q8N5C6 995 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 SH3RF3Q8TEJ3 882 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 TMEM47Q9BQJ4 181 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 RPN1P04843 607 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms