RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 SOWAHDA6NJG2 315 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CAVIN2O95810 425 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 RDXP35241 583 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 MYLK4Q86YV6 388 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CCAR1Q8IX12 1150 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CACTIN-AS1Q8N1I8 211 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 ENOX1Q8TC92 643 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 LSG1Q9H089 658 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 FAM107BQ9H098 131 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 DDX19AQ9NUU7 478 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 MRPL42Q9Y6G3 142 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 KIF1AQ12756 1690 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 H7C1W4 665 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 FSBPO95073 299 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CYP19A1P11511 503 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 ADD1P35611 737 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 IL15P40933 162 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 STX1AQ16623 288 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 KCTD16Q68DU8 428 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 BZW1Q7L1Q6 419 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 SRGAP1Q7Z6B7 1085 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 MSANTD4Q8NCY6 345 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 HNRNPLLQ8WVV9 542 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 EZH1Q92800 747 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZNF570Q96NI8 536 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 SEC31BQ9NQW1 1179 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 HDAC6Q9UBN7 1215 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 ABCF2Q9UG63 623 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 JAG2Q9Y219 1238 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 MAP3K15Q6ZN16 1313 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 NHSL1Q5SYE7 1610 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLIT2O94813 1529 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 GNPATO15228 680 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 SRGAP2O75044 1071 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 ABL2P42684 1182 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 FOXO4P98177 505 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 CCDC40Q4G0X9 1142 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 HHATQ5VTY9 493 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 BLOC1S2Q6QNY1 142 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 GIGYF2Q6Y7W6 1299 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 PODNQ7Z5L7 613 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 NLRP10Q86W26 655 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 SMARCC1Q92922 1105 aaPredicted RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLX1AQ9BQ83 275 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 FAM167BQ9BTA0 163 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 MAGEC2Q9UBF1 373 aaPredicted RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 BLOC1S6Q9UL45 172 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 EIF3HO15372 352 aaKnown RBP eCLIP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 GSDMDP57764 484 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 IGBP1P78318 339 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 HDLBPQ00341 1268 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 GUCY1A3Q02108 690 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 HSP90B2PQ58FF3 399 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 TTMPQ5BVD1 217 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 MIS18BP1Q6P0N0 1132 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 AMOTL1Q8IY63 956 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 NSMCE1Q8WV22 266 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLC39A13Q96H72 371 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 VRTNQ9H8Y1 702 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 PAG1Q9NWQ8 432 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 LMNB1P20700 586 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 FANCCQ00597 558 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 MYO1EQ12965 1108 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 IFT88Q13099 833 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 LONRF1Q17RB8 773 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 CYB5D1Q6P9G0 228 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 NCAPG2Q86XI2 1143 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 KIAA0825Q8IV33 1275 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 ENGASEQ8NFI3 743 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 TRIM10Q9UDY6 481 aa6.47□□□□□ -1.37
SOX2-OT-218ENST00000498731 MARF1Q9Y4F3 1742 aaKnown RBP6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 HIP1O00291 1037 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZSCAN9O15535 394 aaPredicted RBP6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZPR1O75312 459 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 TNNI2P48788 182 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 GUCY1B3Q02153 619 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 TRAF1Q13077 416 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 ITPK1Q13572 414 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 TXNRD1Q16881 649 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 SUSD4Q5VX71 490 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 CREB3L3Q68CJ9 461 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 FUKQ8N0W3 1084 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZBTB38Q8NAP3 1195 aaPredicted RBP6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 B4GALNT2Q8NHY0 566 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 SRP68Q9UHB9 627 aaKnown RBP6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 PCDHB8Q9UN66 801 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 CLEC11AQ9Y240 323 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 THRAP3Q9Y2W1 955 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms