RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 TROAPQ12815 778 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 STK3Q13188 491 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 RAB11FIP4Q86YS3 637 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 ZNF274Q96GC6 653 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 ZSCAN31Q96LW9 406 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 KIF2CQ99661 725 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 CWC22Q9HCG8 908 aaKnown RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 SAGE1Q9NXZ1 904 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 LIMCH1Q9UPQ0 1083 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 TLR2O60603 784 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 CDKL5O76039 1030 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 SLC16A2P36021 539 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 EVCP57679 992 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 CCNA1P78396 465 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 AKAP17AQ02040 695 aaKnown RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 TRAF1Q13077 416 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 CRHR2Q13324 411 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 PLS1Q14651 629 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 TTBK2Q6IQ55 1244 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 BTNL9Q6UXG8 535 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 RASGRP2Q7LDG7 609 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 DNAJC5GQ8N7S2 189 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 ATG4CQ96DT6 458 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 LARP6Q9BRS8 491 aaKnown RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 PAGR1Q9BTK6 254 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 UBA5Q9GZZ9 404 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 FBXO28Q9NVF7 368 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 RNF186Q9NXI6 227 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 SEC63Q9UGP8 760 aaKnown RBP8.83□□□□□ -1
VEGFA-214ENST00000493786 MAD2L2Q9UI95 211 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 PNMA2Q9UL42 364 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 RABGAP1Q9Y3P9 1069 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 CEP350Q5VT06 3117 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
VEGFA-214ENST00000493786 PTPRFP10586 1907 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 VWA5AO00534 786 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 TBC1D8O95759 1140 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 COPB2P35606 906 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
VEGFA-214ENST00000493786 KIF22Q14807 665 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 FAM110CQ1W6H9 321 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 CCDC174Q6PII3 467 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 LBX2Q6XYB7 198 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 TMTC3Q6ZXV5 915 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 TRIM22Q8IYM9 498 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 ADGRF4Q8IZF3 695 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 ANKRD13CQ8N6S4 541 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 GPRC5AQ8NFJ5 357 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 RRP36Q96EU6 259 aaKnown RBP8.82□□□□□ -1
VEGFA-214ENST00000493786 SPZ1Q9BXG8 430 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 VAT1LQ9HCJ6 419 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
VEGFA-214ENST00000493786 CPA4Q9UI42 421 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 PRR12Q9ULL5 1215 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
VEGFA-214ENST00000493786 PFKFB2O60825 505 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 PLEKHA8P1O95397 391 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 SMARCA1P28370 1054 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 SLC4A3P48751 1232 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 OAZ1P54368 228 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 ERVK-9P63128 1117 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 ERVK-24P63145 666 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 ARHGEF6Q15052 776 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 CDC37Q16543 378 aaPredicted RBP8.81□□□□□ -1
VEGFA-214ENST00000493786 WDR78Q5VTH9 848 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 HOMER1Q86YM7 354 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 HSCBQ8IWL3 235 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 CPXCR1Q8N123 301 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 JMYQ8N9B5 988 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 PIBF1Q8WXW3 757 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 TEX13BQ9BXU2 312 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 SLC38A10Q9HBR0 1119 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 NCOA5Q9HCD5 579 aaKnown RBP8.81□□□□□ -1
VEGFA-214ENST00000493786 WBP1LQ9NX94 342 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 NID2Q14112 1375 aa8.81□□□□□ -1
VEGFA-214ENST00000493786 ZBTB5O15062 677 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 SLC25A27O95847 323 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 CDC27P30260 824 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
VEGFA-214ENST00000493786 STAT3P40763 770 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 SNAP25P60880 206 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
VEGFA-214ENST00000493786 ME3Q16798 604 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 TKFCQ3LXA3 575 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 SNRNP48Q6IEG0 339 aaKnown RBP8.8□□□□□ -1
VEGFA-214ENST00000493786 C17orf99Q6UX52 265 aa8.8□□□□□ -1
VEGFA-214ENST00000493786 FBXO11Q86XK2 927 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms