RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 USP17L20D6RJB6 530 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 K7ELQ4 463 aaPredicted RBP14.46□□□□□ -0.09
SNX17-208ENST00000493711 CPLX1O14810 134 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 FDX1P10109 184 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 VCAM1P19320 739 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 USP17L24Q0WX57 530 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 SREBF2Q12772 1141 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 NOGQ13253 232 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
SNX17-208ENST00000493711 ABHD8Q96I13 439 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 ZCCHC17Q9NP64 241 aaKnown RBP14.46□□□□□ -0.09
SNX17-208ENST00000493711 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
SNX17-208ENST00000493711 HPS5Q9UPZ3 1129 aa14.46□□□□□ -0.09
SNX17-208ENST00000493711 GREB1LQ9C091 1923 aaPredicted RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 TESPA1A2RU30 521 aaPredicted RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 KLRF2D3W0D1 207 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 HOXA7P31268 230 aaPredicted RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 GJA5P36382 358 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 LBX1P52954 281 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 DOCK1Q14185 1865 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 ME3Q16798 604 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 OTUD7BQ6GQQ9 843 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 BTNL9Q6UXG8 535 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 NOL8Q76FK4 1167 aaKnown RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 ANKRD23Q86SG2 305 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 SPICE1Q8N0Z3 855 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 GTF3C6Q969F1 213 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 TMX3Q96JJ7 454 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 MS4A4AQ96JQ5 239 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 LLPHQ9BRT6 129 aaKnown RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 WBP1LQ9NX94 342 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 MAD2L2Q9UI95 211 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 PNMA2Q9UL42 364 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
SNX17-208ENST00000493711 AGTPBP1Q9UPW5 1226 aa14.45□□□□□ -0.1
SNX17-208ENST00000493711 MYPNQ86TC9 1320 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 TMEM232C9JQI7 657 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 VEGFBP49765 207 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 STAT2P52630 851 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 TRAF1Q13077 416 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
SNX17-208ENST00000493711 CCL15Q16663 113 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 FAM83BQ5T0W9 1011 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
SNX17-208ENST00000493711 TMTC3Q6ZXV5 915 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 GTF3C2Q8WUA4 911 aaPredicted RBP14.44□□□□□ -0.1
SNX17-208ENST00000493711 MYL10Q9BUA6 226 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 SPZ1Q9BXG8 430 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 TANGO6Q9C0B7 1094 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
SNX17-208ENST00000493711 HOXC10Q9NYD6 342 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 PNMA3Q9UL41 463 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 MTMR7Q9Y216 660 aa14.44□□□□□ -0.1
SNX17-208ENST00000493711 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.44□□□□□ -0.1
SNX17-208ENST00000493711 FAM155AB1AL88 458 aaPredicted RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 CD2BP2O95400 341 aaKnown RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 IFNAR1P17181 557 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 OSBPP22059 807 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 MLLT1Q03111 559 aaPredicted RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 STK3Q13188 491 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 COG2Q14746 738 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 CATSPERGQ6ZRH7 1159 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 TRIM22Q8IYM9 498 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 CAPNS2Q96L46 248 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 LARP6Q9BRS8 491 aaKnown RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 KIF3AQ9Y496 699 aa14.43□□□□□ -0.1
SNX17-208ENST00000493711 RBM19Q9Y4C8 960 aaKnown RBP14.43□□□□□ -0.1
SNX17-208ENST00000493711 RXRAP19793 462 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 MAP2K2P36507 400 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 CCT2P78371 535 aaKnown RBP14.42□□□□□ -0.1
SNX17-208ENST00000493711 IRX3P78415 501 aaPredicted RBP14.42□□□□□ -0.1
SNX17-208ENST00000493711 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
SNX17-208ENST00000493711 SCRN1Q12765 414 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 MOGSQ13724 837 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 KIAA1755Q5JYT7 1200 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 KCTD1Q719H9 257 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 CCDC144CPQ8IYA2 1237 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 BRI3BPQ8WY22 251 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 INTS4Q96HW7 963 aaKnown RBP14.42□□□□□ -0.1
SNX17-208ENST00000493711 CTDP1Q9Y5B0 961 aaPredicted RBP14.42□□□□□ -0.1
SNX17-208ENST00000493711 TRPM7Q96QT4 1865 aa14.42□□□□□ -0.1
SNX17-208ENST00000493711 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 FLOT1O75955 427 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 ALDH1A1P00352 501 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 HSP90AA1P07900 732 aaKnown RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 GOLGA8HP0CJ92 632 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 CDC27P30260 824 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 ADD1P35611 737 aaKnown RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 TM4SF4P48230 202 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 HMGN5P82970 282 aaKnown RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 CUL4AQ13619 759 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms