RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CRACR2BQ8N4Y2 399 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 PI4K2BQ8TCG2 481 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 MICAL1Q8TDZ2 1067 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 PAK6Q9NQU5 681 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 PCDHA11Q9Y5I1 949 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 NOP56O00567 594 aaKnown RBP7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 GSNP06396 782 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 SYPP08247 313 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 TCFL5Q9UL49 500 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 MINPP1Q9UNW1 487 aa7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 DIS3Q9Y2L1 958 aaKnown RBP7.46□□□□□ -1.22
HMGB1P38-201ENST00000490557 A0A087WZG4 1122 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 SUSD5O60279 629 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 FUT4P22083 530 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 GP2P55259 537 aaKnown RBP7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 CRTC3Q6UUV7 619 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 RNF111Q6ZNA4 994 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 EPN3Q9H201 632 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 SLAMF8Q9P0V8 285 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 AKT3Q9Y243 479 aa7.45□□□□□ -1.22
HMGB1P38-201ENST00000490557 FKTNO75072 461 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 ESR1P03372 595 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 ENDOUP21128 410 aaKnown RBP7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 NOP2P46087 812 aaKnown RBP7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 POU4F1Q01851 419 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 SLC23A3Q6PIS1 610 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 CCDC120Q96HB5 630 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 FOXP3Q9BZS1 431 aa7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
HMGB1P38-201ENST00000490557 H0Y8X5 98 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 ADAMTS4O75173 837 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 BMP8BP34820 402 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 IFRD2Q12894 506 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 MRM1Q6IN84 353 aaKnown RBP7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 USHBP1Q8N6Y0 703 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 LINC00116Q8NCU8 138 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 BVESQ8NE79 360 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 ALPK1Q96QP1 1244 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 SRPK1Q96SB4 655 aaKnown RBP7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 CDADC1Q9BWV3 514 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 OSBPL2Q9H1P3 480 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 APEX2Q9UBZ4 518 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 CGGBP1Q9UFW8 167 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 SUSD2Q9UGT4 822 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 ZMYM5Q9UJ78 669 aa7.43□□□□□ -1.22
HMGB1P38-201ENST00000490557 IQCA1LA6NCM1 817 aa7.42□□□□□ -1.22
HMGB1P38-201ENST00000490557 CD3EP07766 207 aa7.42□□□□□ -1.22
HMGB1P38-201ENST00000490557 AMPD2Q01433 879 aa7.42□□□□□ -1.22
HMGB1P38-201ENST00000490557 WAPLQ7Z5K2 1190 aa7.42□□□□□ -1.22
HMGB1P38-201ENST00000490557 Q8N3U1 123 aa7.42□□□□□ -1.22
HMGB1P38-201ENST00000490557 PDPK1O15530 556 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 GSTM1P09488 218 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 VAV1P15498 845 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 CTSKP43235 329 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 DUSP4Q13115 394 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 NFE2L2Q16236 605 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 ABI1Q8IZP0 508 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 ARHGEF39Q8N4T4 335 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 NAT16Q8N8M0 369 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 ST13P5Q8NFI4 369 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 DEPDC7Q96QD5 511 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 CCDC113Q9H0I3 377 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 ZSWIM4Q9H7M6 989 aa7.41□□□□□ -1.22
HMGB1P38-201ENST00000490557 KCNH1O95259 989 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 TEKQ02763 1124 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 GRB10Q13322 594 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 SERINC3Q13530 473 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 BMS1Q14692 1282 aaKnown RBP7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 DPY19L1Q2PZI1 675 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 TMEM59LQ9UK28 342 aa7.4□□□□□ -1.22
HMGB1P38-201ENST00000490557 VAMP4O75379 141 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZNF205O95201 554 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 ITGAVP06756 1048 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 HK2P52789 917 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 RASGRF1Q13972 1273 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 MKL1Q969V6 931 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 MRFAP1L1Q96HT8 127 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 LNPKQ9C0E8 428 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 SNTG2Q9NY99 539 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 EMC9Q9Y3B6 208 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 MSRB2Q9Y3D2 182 aa7.39□□□□□ -1.23
HMGB1P38-201ENST00000490557 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 RAC2P15153 192 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 CCDC144BQ3MJ40 725 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 RALGPS1Q5JS13 557 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZNF227Q86WZ6 799 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms