RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SSU72P8A0A1W2PR75 194 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 MEIS3P2A8K0S8 358 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 TNFRSF10CO14798 259 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 ACRP10323 421 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 ZNF16P17020 682 aaPredicted RBP7.62□□□□□ -1.19
SMC4-219ENST00000487747 CCNFP41002 786 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 ZNF165P49910 485 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 RAD51AP2Q09MP3 1159 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 CHST7Q9NS84 486 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 GFOD1Q9NXC2 390 aa7.62□□□□□ -1.19
SMC4-219ENST00000487747 TEX51A0A1B0GUA7 166 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 C9IYK1 514 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 KIR2DL1P43626 348 aaPredicted RBP7.61□□□□□ -1.19
SMC4-219ENST00000487747 KIR2DL2P43627 348 aaPredicted RBP7.61□□□□□ -1.19
SMC4-219ENST00000487747 SLC14A2Q15849 920 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 TMEM132EQ6IEE7 984 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 KIAA0825Q8IV33 1275 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 SPON2Q9BUD6 331 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
SMC4-219ENST00000487747 MKRN2Q9H000 416 aaKnown RBP7.61□□□□□ -1.19
SMC4-219ENST00000487747 OR14I1A6ND48 311 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 FADS2P1A8MWK0 482 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 SEMA7AO75326 666 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 AUHQ13825 339 aaKnown RBP7.6□□□□□ -1.19
SMC4-219ENST00000487747 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 TTLL10Q6ZVT0 673 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 FBXL21Q9UKT6 434 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 PCDHGB7Q9Y5F8 929 aa7.6□□□□□ -1.19
SMC4-219ENST00000487747 SHOXO15266 292 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 RTP1P59025 263 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 SSPNQ14714 243 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
SMC4-219ENST00000487747 LILRA6Q6PI73 481 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 CRTC3Q6UUV7 619 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 ERVK13-1Q9NX77 482 aa7.59□□□□□ -1.19
SMC4-219ENST00000487747 MBD1Q9UIS9 605 aaPredicted RBP7.59□□□□□ -1.19
SMC4-219ENST00000487747 GPR55Q9Y2T6 319 aaPredicted RBP7.59□□□□□ -1.19
SMC4-219ENST00000487747 INHBBP09529 407 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
SMC4-219ENST00000487747 FANCCQ00597 558 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 HSF5Q4G112 596 aaPredicted RBP7.58□□□□□ -1.2
SMC4-219ENST00000487747 TDRD10Q5VZ19 366 aaKnown RBP7.58□□□□□ -1.2
SMC4-219ENST00000487747 TMEM52Q8NDY8 209 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 FCRL2Q96LA5 508 aaPredicted RBP7.58□□□□□ -1.2
SMC4-219ENST00000487747 CRTAC1Q9NQ79 661 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 ZNRF3Q9ULT6 936 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 PCDHB12Q9Y5F1 795 aa7.58□□□□□ -1.2
SMC4-219ENST00000487747 ZNF205O95201 554 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 VIPR1P32241 457 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 ZNF76P36508 570 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 EPHB3P54753 998 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
SMC4-219ENST00000487747 SUCOQ9UBS9 1254 aaKnown RBP7.57□□□□□ -1.2
SMC4-219ENST00000487747 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
SMC4-219ENST00000487747 VAV1P15498 845 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 PNLIPP16233 465 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 BMP8BP34820 402 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 ZYXQ15942 572 aaKnown RBP7.56□□□□□ -1.2
SMC4-219ENST00000487747 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 PPFIBP1Q86W92 1011 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 CNTD2Q9H8S5 307 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 TNFRSF10DQ9UBN6 386 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 KCTD3Q9Y597 815 aa7.56□□□□□ -1.2
SMC4-219ENST00000487747 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
SMC4-219ENST00000487747 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
SMC4-219ENST00000487747 SLCO6A1Q86UG4 719 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 PPT2Q9UMR5 302 aa7.55□□□□□ -1.2
SMC4-219ENST00000487747 PI3P19957 117 aa7.54□□□□□ -1.2
SMC4-219ENST00000487747 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
SMC4-219ENST00000487747 YBX1P67809 324 aaKnown RBP7.54□□□□□ -1.2
SMC4-219ENST00000487747 AXDND1Q5T1B0 1012 aaPredicted RBP7.54□□□□□ -1.2
SMC4-219ENST00000487747 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
SMC4-219ENST00000487747 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
SMC4-219ENST00000487747 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
SMC4-219ENST00000487747 EPB41L4AQ9HCS5 686 aaPredicted RBP7.54□□□□□ -1.2
SMC4-219ENST00000487747 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
SMC4-219ENST00000487747 PRKCAP17252 672 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 HOXA5P20719 270 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 GALNT18Q6P9A2 607 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 SLC12A9Q9BXP2 914 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 SIRT5Q9NXA8 310 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 TAF6LQ9Y6J9 622 aa7.53□□□□□ -1.2
SMC4-219ENST00000487747 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
SMC4-219ENST00000487747 H0Y8X5 98 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 BMP7P18075 431 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 CDR1P51861 262 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 PMS1P54277 932 aaKnown RBP7.52□□□□□ -1.21
SMC4-219ENST00000487747 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 BRF1Q92994 677 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 FERD3LQ96RJ6 166 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms