RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SERPINB13Q9UIV8 391 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 PTPRCP08575 1304 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 CFAP54Q96N23 3096 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 FLOT1O75955 427 aa18.66■□□□□ 0.58
U2AF1-211ENST00000486519 TAP1Q03518 808 aa18.66■□□□□ 0.58
U2AF1-211ENST00000486519 FAM178BQ8IXR5 827 aa18.66■□□□□ 0.58
U2AF1-211ENST00000486519 GJD3Q8N144 294 aa18.66■□□□□ 0.58
U2AF1-211ENST00000486519 NOC4LQ9BVI4 516 aaKnown RBP18.66■□□□□ 0.58
U2AF1-211ENST00000486519 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
U2AF1-211ENST00000486519 GRIN2DO15399 1336 aa18.66■□□□□ 0.58
U2AF1-211ENST00000486519 DUSP11O75319 330 aaKnown RBP18.65■□□□□ 0.58
U2AF1-211ENST00000486519 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
U2AF1-211ENST00000486519 IL9P15248 144 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 BEX3Q00994 111 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 TMEM67Q5HYA8 995 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 UPF3AQ9H1J1 476 aaKnown RBP18.65■□□□□ 0.58
U2AF1-211ENST00000486519 PIH1D3Q9NQM4 214 aaKnown RBP18.65■□□□□ 0.58
U2AF1-211ENST00000486519 FBXO28Q9NVF7 368 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
U2AF1-211ENST00000486519 MYH8P13535 1937 aa18.64■□□□□ 0.58
U2AF1-211ENST00000486519 CACNA1AO00555 2505 aa18.64■□□□□ 0.57
U2AF1-211ENST00000486519 TLR3O15455 904 aaKnown RBP18.64■□□□□ 0.57
U2AF1-211ENST00000486519 ATF7IPQ6VMQ6 1270 aa18.64■□□□□ 0.57
U2AF1-211ENST00000486519 MIGA1Q8NAN2 632 aa18.64■□□□□ 0.57
U2AF1-211ENST00000486519 TRPV6Q9H1D0 765 aa18.64■□□□□ 0.57
U2AF1-211ENST00000486519 EHD4Q9H223 541 aa18.64■□□□□ 0.57
U2AF1-211ENST00000486519 DIS3Q9Y2L1 958 aaKnown RBP18.64■□□□□ 0.57
U2AF1-211ENST00000486519 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
U2AF1-211ENST00000486519 SLC43A3Q8NBI5 491 aa18.63■□□□□ 0.57
U2AF1-211ENST00000486519 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.63■□□□□ 0.57
U2AF1-211ENST00000486519 AGBL1Q96MI9 1066 aa18.63■□□□□ 0.57
U2AF1-211ENST00000486519 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
U2AF1-211ENST00000486519 TET1Q8NFU7 2136 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 GJA9P57773 515 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 KCTD2Q14681 263 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 GNASQ5JWF2 1037 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 GDPD5Q8WTR4 605 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 FGD4Q96M96 766 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 MEIS3Q99687 375 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 ASTN1O14525 1302 aa18.62■□□□□ 0.57
U2AF1-211ENST00000486519 B4GALT4O60513 344 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 SLC25A27O95847 323 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 SSTR3P32745 418 aaPredicted RBP18.61■□□□□ 0.57
U2AF1-211ENST00000486519 USP5P45974 858 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 PCSK9Q8NBP7 692 aaKnown RBP18.61■□□□□ 0.57
U2AF1-211ENST00000486519 REPS2Q8NFH8 660 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 ADAMTS5Q9UNA0 930 aa18.61■□□□□ 0.57
U2AF1-211ENST00000486519 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
U2AF1-211ENST00000486519 CYP7A1P22680 504 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 ZAP70P43403 619 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 GABPAQ06546 454 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 CSPP1Q1MSJ5 1256 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 HFE2Q6ZVN8 426 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 DEFB128Q7Z7B8 93 aa18.6■□□□□ 0.57
U2AF1-211ENST00000486519 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-211ENST00000486519 ZNF214Q9UL59 606 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-211ENST00000486519 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
U2AF1-211ENST00000486519 LCHNA4D1U4 455 aa18.59■□□□□ 0.57
U2AF1-211ENST00000486519 ACVR2BQ13705 512 aa18.59■□□□□ 0.57
U2AF1-211ENST00000486519 PRSS33Q8NF86 280 aa18.59■□□□□ 0.57
U2AF1-211ENST00000486519 TRIOO75962 3097 aa18.59■□□□□ 0.57
U2AF1-211ENST00000486519 TANC1Q9C0D5 1861 aa18.58■□□□□ 0.57
U2AF1-211ENST00000486519 DNAJC25-GNG10A0A024R161 153 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
U2AF1-211ENST00000486519 POTEB3A0JP26 581 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 UQCRFS1P1P0C7P4 283 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 STAT3P40763 770 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 PSMC6P62333 389 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 POTEBQ6S5H4 581 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
U2AF1-211ENST00000486519 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.58■□□□□ 0.56
U2AF1-211ENST00000486519 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
U2AF1-211ENST00000486519 VWA5AO00534 786 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 SRGAP3O43295 1099 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 KCNA5P22460 613 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 LEXMQ3ZCV2 418 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 DBNDD2Q9BQY9 259 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 KCNH6Q9H252 994 aa18.57■□□□□ 0.56
U2AF1-211ENST00000486519 SIP14410 1827 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 DCXO43602 365 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 CYP2D6P10635 497 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 CYP2C9P11712 490 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 ALADP13716 330 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 TTC6Q86TZ1 520 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 RPUSD2Q8IZ73 545 aaKnown RBP18.56■□□□□ 0.56
U2AF1-211ENST00000486519 VCPKMTQ9H867 229 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 DDX49Q9Y6V7 483 aaKnown RBP18.56■□□□□ 0.56
U2AF1-211ENST00000486519 C5orf42Q9H799 3197 aa18.56■□□□□ 0.56
U2AF1-211ENST00000486519 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms