RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 MYH4Q9Y623 1939 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 DYNC1I1O14576 645 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 UBE2Q1Q7Z7E8 422 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
DDX56-212ENST00000485367 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 A0A0G2JMZ2 1700 aa12.57□□□□□ -0.4
DDX56-212ENST00000485367 IGKV6D-41A0A0C4DH26 115 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 F5H6K3 240 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 FOXP2O15409 715 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 ERCC3P19447 782 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 KLRC3Q07444 240 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 CACNB2Q08289 660 aaPredicted RBP12.56□□□□□ -0.4
DDX56-212ENST00000485367 GRB14Q14449 540 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 NCAPG2Q86XI2 1143 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 COL11A1P12107 1806 aaPredicted RBP12.56□□□□□ -0.4
DDX56-212ENST00000485367 NDUFB10O96000 172 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 CAPN2P17655 700 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 TFAP4Q01664 338 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
DDX56-212ENST00000485367 TMEM132BQ14DG7 1078 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 HTATIP2Q9BUP3 242 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 MROH8Q9H579 483 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
DDX56-212ENST00000485367 STRNO43815 780 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
DDX56-212ENST00000485367 TTLL1O95922 423 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 ADORA2AP29274 412 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
DDX56-212ENST00000485367 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
DDX56-212ENST00000485367 MFSD14CQ5VZR4 134 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 TICAM2Q86XR7 235 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 LRRC47Q8N1G4 583 aaKnown RBP12.55□□□□□ -0.4
DDX56-212ENST00000485367 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 ADAMTS5Q9UNA0 930 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
DDX56-212ENST00000485367 H0YGN5 161 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 VWA5AO00534 786 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 HOXC6P09630 235 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 NPLOC4Q8TAT6 608 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 DIS3LQ8TF46 1054 aaKnown RBP12.54□□□□□ -0.4
DDX56-212ENST00000485367 MKL1Q969V6 931 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 PAWRQ96IZ0 340 aaKnown RBP12.54□□□□□ -0.4
DDX56-212ENST00000485367 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
DDX56-212ENST00000485367 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
DDX56-212ENST00000485367 SLC25A27O95847 323 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 STAT3P40763 770 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 ALX1Q15699 326 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX56-212ENST00000485367 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
DDX56-212ENST00000485367 COBLO75128 1261 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 FGAP02671 866 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 FCER1AP12319 257 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 SDSP20132 328 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 CYP2C19P33261 490 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
DDX56-212ENST00000485367 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 ANKLE1Q8NAG6 615 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 CHMP4CQ96CF2 233 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
DDX56-212ENST00000485367 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.4
DDX56-212ENST00000485367 ZNF236Q9UL36 1845 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 MBD3O95983 291 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 HSPD1P10809 573 aaKnown RBP12.52□□□□□ -0.41
DDX56-212ENST00000485367 CNGA1P29973 690 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
DDX56-212ENST00000485367 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 REPS2Q8NFH8 660 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 KIFC2Q96AC6 838 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 MMP19Q99542 508 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 TOMM22Q9NS69 142 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 OGDHLQ9ULD0 1010 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 SYNPO2Q9UMS6 1093 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms