RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 FLOT1O75955 427 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 ANTXR2P58335 489 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 HAND2P61296 217 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 GRB14Q14449 540 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 GRM4Q14833 912 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 WTAPQ15007 396 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 ANKRD1Q15327 319 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 C8orf34Q49A92 452 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SLFN13Q68D06 897 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 STOX1Q6ZVD7 989 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 ARMC5Q96C12 935 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 P2RX7Q99572 595 aaKnown RBP5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SPATC1LQ9H0A9 340 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 RANBP17Q9H2T7 1088 aaKnown RBP5.95□□□□□ -1.46
HDAC6-223ENST00000480525 RIOX1Q9H6W3 641 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 KAT14Q9H8E8 782 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 LY9Q9HBG7 655 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 RBM28Q9NW13 759 aaKnown RBP5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SLC5A4Q9NY91 659 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SRRDQ9UH36 339 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 KIAA1217Q5T5P2 1943 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 PFASO15067 1338 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 LRRC37A2A6NM11 1700 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 IFIT3O14879 490 aaKnown RBP5.94□□□□□ -1.46
HDAC6-223ENST00000480525 PRC1O43663 620 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 ZBED4O75132 1171 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 CNMDO75829 334 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 ICAM1P05362 532 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 PARP1P09874 1014 aaKnown RBP5.94□□□□□ -1.46
HDAC6-223ENST00000480525 CYP2C8P10632 490 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 LBX1P52954 281 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 SHROOM1Q2M3G4 852 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-223ENST00000480525 FAM47AQ5JRC9 791 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 KIAA1755Q5JYT7 1200 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 MORN1Q5T089 497 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 OLFML2BQ68BL8 750 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 BLOC1S2Q6QNY1 142 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 POTEEQ6S8J3 1075 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 RUFY3Q7L099 469 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 CYB5R4Q7L1T6 521 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 OTOP1Q7RTM1 612 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 CATIPQ7Z7H3 387 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 SLAIN1Q8ND83 568 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 COA7Q96BR5 231 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF274Q96GC6 653 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-223ENST00000480525 EFCC1Q9HA90 598 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 TOMM22Q9NS69 142 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-223ENST00000480525 GJD2Q9UKL4 321 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 PTPN22Q9Y2R2 807 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 SNX14Q9Y5W7 946 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 MCM3APO60318 1980 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF536O15090 1300 aa5.94□□□□□ -1.46
HDAC6-223ENST00000480525 ZSWIM8A7E2V4 1837 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 CENPFP49454 3210 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 DNAJC25-GNG10A0A024R161 153 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 TNPO2O14787 897 aaKnown RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 NMT2O60551 498 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MSCO60682 206 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 RPS6KB1P23443 525 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 PTPREP23469 700 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 STAT3P40763 770 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 PSMC4P43686 418 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MKRN3Q13064 507 aaKnown RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 GRM1Q13255 1194 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 TMEM132BQ14DG7 1078 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 SLC4A8Q2Y0W8 1093 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 TMEM67Q5HYA8 995 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 RRP12Q5JTH9 1297 aaKnown RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 FAM83BQ5T0W9 1011 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MAP3K21Q5TCX8 1036 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 SYDE2Q5VT97 1194 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MCTP2Q6DN12 878 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 PPP1R18Q6NYC8 613 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 APOA5Q6Q788 366 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MAMDC4Q6UXC1 1216 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 NBPF11Q86T75 865 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 CCDC84Q86UT8 332 aaPredicted RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 RASEFQ8IZ41 740 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF654Q8IZM8 581 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 ANKRD13CQ8N6S4 541 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 CTCFLQ8NI51 663 aaPredicted RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 TRIM47Q96LD4 638 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 APBA2Q99767 749 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 NUDT12Q9BQG2 462 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MOV10L1Q9BXT6 1211 aaKnown RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 GLT8D2Q9H1C3 349 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 UPF2Q9HAU5 1272 aaKnown RBP5.93□□□□□ -1.46
HDAC6-223ENST00000480525 TXNRD2Q9NNW7 524 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 BTBD7Q9P203 1132 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 MAD2L2Q9UI95 211 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 PRR12Q9ULL5 1215 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 SLC12A7Q9Y666 1083 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 CYP46A1Q9Y6A2 500 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 IVNS1ABPQ9Y6Y0 642 aa5.93□□□□□ -1.46
HDAC6-223ENST00000480525 ABCB11O95342 1321 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms