RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TEX13BQ9BXU2 312 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 MTIF3Q9H2K0 278 aaKnown RBP19.39■□□□□ 0.69
DDX56-210ENST00000479440 ARMT1Q9H993 441 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 A0A0U1RQG5 324 aaPredicted RBP19.38■□□□□ 0.69
DDX56-210ENST00000479440 TLR3O15455 904 aaKnown RBP19.38■□□□□ 0.69
DDX56-210ENST00000479440 RAD21O60216 631 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 DUSP11O75319 330 aaKnown RBP19.38■□□□□ 0.69
DDX56-210ENST00000479440 RASIP1Q5U651 963 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 CCSAPQ6IQ19 270 aaPredicted RBP19.38■□□□□ 0.69
DDX56-210ENST00000479440 C16orf86Q6ZW13 317 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 REPS2Q8NFH8 660 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 DDX11Q96FC9 970 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 PRDM12Q9H4Q4 367 aa19.38■□□□□ 0.69
DDX56-210ENST00000479440 MBD4O95243 580 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 C6orf222P0C671 652 aaPredicted RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 PBX2P40425 430 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 CDK8P49336 464 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 MRPS5P82675 430 aaKnown RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 FAM83BQ5T0W9 1011 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 SNRNP48Q6IEG0 339 aaKnown RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 MAMDC4Q6UXC1 1216 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 ZNF467Q7Z7K2 595 aaPredicted RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 UHRF1Q96T88 793 aaPredicted RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 IL1RAPL2Q9NP60 686 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 MSRAQ9UJ68 235 aa19.37■□□□□ 0.69
DDX56-210ENST00000479440 ZNFX1Q9P2E3 1918 aaKnown RBP19.37■□□□□ 0.69
DDX56-210ENST00000479440 MUC3AQ02505 3323 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 ASGR1P07306 291 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 CSF2RAP15509 400 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 C12orf60Q5U649 245 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 CLASRPQ8N2M8 674 aaKnown RBP19.36■□□□□ 0.69
DDX56-210ENST00000479440 VTI1AQ96AJ9 217 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 SLF1Q9BQI6 1058 aa19.36■□□□□ 0.69
DDX56-210ENST00000479440 MYADML2A6NDP7 307 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 GRXCR1A8MXD5 290 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 ARVCFO00192 962 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 CDK7P50613 346 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 FAM126BQ8IXS8 530 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 RHPN1Q8TCX5 695 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
DDX56-210ENST00000479440 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX56-210ENST00000479440 TSPYL2Q9H2G4 693 aaPredicted RBP19.35■□□□□ 0.69
DDX56-210ENST00000479440 SMCHD1A6NHR9 2005 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 PRKAB2O43741 272 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 SNAI1O95863 264 aaPredicted RBP19.34■□□□□ 0.69
DDX56-210ENST00000479440 IFIT2P09913 472 aaKnown RBP19.34■□□□□ 0.69
DDX56-210ENST00000479440 IGFBP4P22692 258 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 ADD2P35612 726 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 PLA2G5P39877 138 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 ACVR2BQ13705 512 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 ZNF365Q70YC5 407 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 UPF3AQ9H1J1 476 aaKnown RBP19.34■□□□□ 0.69
DDX56-210ENST00000479440 ABHD16BQ9H3Z7 469 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
DDX56-210ENST00000479440 CTDP1Q9Y5B0 961 aaPredicted RBP19.34■□□□□ 0.69
DDX56-210ENST00000479440 TTC28Q96AY4 2481 aa19.34■□□□□ 0.69
DDX56-210ENST00000479440 DNAJC25-GNG10A0A024R161 153 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 USP17L12C9JPN9 530 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 USP17L21D6R901 530 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 ACRP10323 421 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 GJA9P57773 515 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 C16orf59Q7L2K0 433 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 HERVK_113Q902F9 699 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 IL23AQ9NPF7 189 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.68
DDX56-210ENST00000479440 ARPP21Q9UBL0 812 aaPredicted RBP19.33■□□□□ 0.68
DDX56-210ENST00000479440 ZBED9Q6R2W3 1325 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 BAZ2AQ9UIF9 1905 aaKnown RBP19.32■□□□□ 0.68
DDX56-210ENST00000479440 CYP2D7A0A087X1C5 515 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 ATP2A1O14983 1001 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 ADGRE1Q14246 886 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDX56-210ENST00000479440 FAM122AQ96E09 287 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 SLC28A3Q9HAS3 691 aa19.32■□□□□ 0.68
DDX56-210ENST00000479440 ZBED4O75132 1171 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 CCDC85BQ15834 202 aaPredicted RBP19.31■□□□□ 0.68
DDX56-210ENST00000479440 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 ANKRD35Q8N283 1001 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 PRPF38AQ8NAV1 312 aaKnown RBP19.31■□□□□ 0.68
DDX56-210ENST00000479440 NKX2-4Q9H2Z4 354 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 FBXO40Q9UH90 709 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 RAPGEFL1Q9UHV5 662 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 SLC4A4Q9Y6R1 1079 aa19.31■□□□□ 0.68
DDX56-210ENST00000479440 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
DDX56-210ENST00000479440 RLBP1P12271 317 aa19.3■□□□□ 0.68
DDX56-210ENST00000479440 SLC4A3P48751 1232 aa19.3■□□□□ 0.68
DDX56-210ENST00000479440 ARMCX2Q7L311 632 aa19.3■□□□□ 0.68
DDX56-210ENST00000479440 NUP88Q99567 741 aaPredicted RBP19.3■□□□□ 0.68
DDX56-210ENST00000479440 HIPK3Q9H422 1215 aa19.3■□□□□ 0.68
DDX56-210ENST00000479440 RIPK3Q9Y572 518 aa19.3■□□□□ 0.68
DDX56-210ENST00000479440 SMIM22K7EJ46 135 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 ADCY6O43306 1168 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 NDUFB10O96000 172 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CD4P01730 458 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 FGBP02675 491 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CYP2C18P33260 490 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms