RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 ZCCHC17Q9NP64 241 aaKnown RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 M0R2N6 131 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 N4BP3O15049 544 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS52-217ENST00000478934 STAT6P42226 847 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 BTDP43251 543 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 GRM4Q14833 912 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 RASSF8Q8NHQ8 419 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 STXBP3O00186 592 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 CCP110O43303 1012 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 PPP2R3AQ06190 1150 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 GRAPQ13588 217 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 DHX8Q14562 1220 aaKnown RBP12.21□□□□□ -0.45
VPS52-217ENST00000478934 VPS72Q15906 364 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 DGKHQ86XP1 1220 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
VPS52-217ENST00000478934 TFR2Q9UP52 801 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
VPS52-217ENST00000478934 KLRF2D3W0D1 207 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.46
VPS52-217ENST00000478934 MFAP3LO75121 409 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 SASH3O75995 380 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 UFL1O94874 794 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 BMP15O95972 392 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.46
VPS52-217ENST00000478934 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 CNBD1Q8NA66 436 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 HPS3Q969F9 1004 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.46
VPS52-217ENST00000478934 FAM53CQ9NYF3 392 aa12.21□□□□□ -0.46
VPS52-217ENST00000478934 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 EIF6P56537 245 aaKnown RBP12.2□□□□□ -0.46
VPS52-217ENST00000478934 ERVK-24P63145 666 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 PAK1Q13153 545 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 PDS5AQ29RF7 1337 aaKnown RBP12.2□□□□□ -0.46
VPS52-217ENST00000478934 KCNJ18B7U540 433 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 PES1O00541 588 aaKnown RBP12.2□□□□□ -0.46
VPS52-217ENST00000478934 CDK8P49336 464 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
VPS52-217ENST00000478934 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 KCNJ12Q14500 433 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 BMS1Q14692 1282 aaKnown RBP12.2□□□□□ -0.46
VPS52-217ENST00000478934 LETM2Q2VYF4 491 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 UIMC1Q96RL1 719 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 DISC1Q9NRI5 854 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 MRFAP1Q9Y605 127 aa12.2□□□□□ -0.46
VPS52-217ENST00000478934 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 GYS2P54840 703 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 GABPB1Q06547 395 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 PANX2Q96RD6 677 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 EYA3Q99504 573 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 CHP1Q99653 195 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 USP21Q9UK80 565 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 DLEC1Q9Y238 1755 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 PALM3A6NDB9 673 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 EFCAB8A8MWE9 144 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 CCDC175P0C221 793 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 CALML3P27482 149 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 PIGSQ96S52 555 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 BIN2Q9UBW5 565 aaPredicted RBP12.19□□□□□ -0.46
VPS52-217ENST00000478934 TRIM10Q9UDY6 481 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 RWDD2AQ9UIY3 292 aa12.19□□□□□ -0.46
VPS52-217ENST00000478934 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
VPS52-217ENST00000478934 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS52-217ENST00000478934 KIF20AO95235 890 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 BAG3O95817 575 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
VPS52-217ENST00000478934 NAPAP54920 295 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 UBXN1Q04323 297 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 PICALMQ13492 652 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms