RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 SOGA3Q5TF21 947 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
RBM39-231ENST00000477334 ADAT2Q7Z6V5 191 aaKnown RBP6.54□□□□□ -1.36
RBM39-231ENST00000477334 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 FGD4Q96M96 766 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 GPR62Q9BZJ7 368 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 TRIT1Q9H3H1 467 aaKnown RBP6.54□□□□□ -1.36
RBM39-231ENST00000477334 GP6Q9HCN6 339 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 GFOD1Q9NXC2 390 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 MINPP1Q9UNW1 487 aa6.54□□□□□ -1.36
RBM39-231ENST00000477334 PRAMEF1O95521 474 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 SRFP11831 508 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 TPP2P29144 1249 aaPredicted RBP6.53□□□□□ -1.36
RBM39-231ENST00000477334 FZD5Q13467 585 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 TCEAL1Q15170 157 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 NOL9Q5SY16 702 aaKnown RBP6.53□□□□□ -1.36
RBM39-231ENST00000477334 BRF1Q92994 677 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 ATP13A1Q9HD20 1204 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 GPATCH2Q9NW75 528 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 LMCD1Q9NZU5 365 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 SIRPGQ9P1W8 387 aa6.53□□□□□ -1.36
RBM39-231ENST00000477334 JAG1P78504 1218 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 SERINC3Q13530 473 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 ADCY4Q8NFM4 1077 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 DSCC1Q9BVC3 393 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 KLHL25Q9H0H3 589 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 CHST7Q9NS84 486 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 SUSD2Q9UGT4 822 aa6.52□□□□□ -1.37
RBM39-231ENST00000477334 ANKRD34BA5PLL1 514 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 SIGLEC6O43699 453 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 SUSD5O60279 629 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 ITGA4P13612 1032 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 ZNF445P59923 1031 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 CCDC144BQ3MJ40 725 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 ZNF648Q5T619 568 aaPredicted RBP6.51□□□□□ -1.37
RBM39-231ENST00000477334 DPH6Q7L8W6 267 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 EEPD1Q7L9B9 569 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 TSPYL5Q86VY4 417 aaPredicted RBP6.51□□□□□ -1.37
RBM39-231ENST00000477334 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 ENOX1Q8TC92 643 aaKnown RBP6.51□□□□□ -1.37
RBM39-231ENST00000477334 PPP1R14AQ96A00 147 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 HDAC8Q9BY41 377 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 NOL6Q9H6R4 1146 aaKnown RBP6.51□□□□□ -1.37
RBM39-231ENST00000477334 WHRNQ9P202 907 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 APEX2Q9UBZ4 518 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 CTNND2Q9UQB3 1225 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 SUGT1Q9Y2Z0 365 aa6.51□□□□□ -1.37
RBM39-231ENST00000477334 PPM1BO75688 479 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 FARP2O94887 1054 aaPredicted RBP6.5□□□□□ -1.37
RBM39-231ENST00000477334 BMS1Q14692 1282 aaKnown RBP6.5□□□□□ -1.37
RBM39-231ENST00000477334 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 SV2CQ496J9 727 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
RBM39-231ENST00000477334 TCTN2Q96GX1 697 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 SRPK1Q96SB4 655 aaKnown RBP6.5□□□□□ -1.37
RBM39-231ENST00000477334 APBA2Q99767 749 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 ZSWIM4Q9H7M6 989 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 CARS2Q9HA77 564 aaKnown RBP6.5□□□□□ -1.37
RBM39-231ENST00000477334 DUSP13Q9UII6 198 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 MSRB2Q9Y3D2 182 aa6.5□□□□□ -1.37
RBM39-231ENST00000477334 PDPK1O15530 556 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 LTKP29376 864 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
RBM39-231ENST00000477334 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 GAB4Q2WGN9 574 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 CREG2Q8IUH2 290 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 FIBCD1Q8N539 461 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 DAGLBQ8NCG7 672 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 LGR4Q9BXB1 951 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 FHOD1Q9Y613 1164 aa6.49□□□□□ -1.37
RBM39-231ENST00000477334 ARID1BQ8NFD5 2236 aaPredicted RBP6.48□□□□□ -1.37
RBM39-231ENST00000477334 FAM221BA6H8Z2 402 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 H0Y8X5 98 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 ESR1P03372 595 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 NAT2P11245 290 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 CTSKP43235 329 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 RASA3Q14644 834 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 CRTC3Q6UUV7 619 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 TMPRSS7Q7RTY8 843 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 ZNF655Q8N720 491 aaPredicted RBP6.48□□□□□ -1.37
RBM39-231ENST00000477334 ZNF513Q8N8E2 541 aaPredicted RBP6.48□□□□□ -1.37
RBM39-231ENST00000477334 ZDHHC15Q96MV8 337 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 LRP2BPQ9P2M1 347 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 PCDHA11Q9Y5I1 949 aa6.48□□□□□ -1.37
RBM39-231ENST00000477334 A0A087WZG4 1122 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 ZNF503-AS2A6NEH8 195 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 AFMP43652 599 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 EGR3Q06889 387 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
RBM39-231ENST00000477334 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms