RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 TCEA2Q15560 299 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 ZC3H12BQ5HYM0 836 aaKnown RBP8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 FAM209AQ5JX71 171 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 KIAA0907Q7Z7F0 614 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 ARHGEF39Q8N4T4 335 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 FIBCD1Q8N539 461 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 SYTL5Q8TDW5 730 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 EXOC2Q96KP1 924 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 MRGPRX3Q96LB0 322 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 CGGBP1Q9UFW8 167 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 MINPP1Q9UNW1 487 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 EMC9Q9Y3B6 208 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 FHOD1Q9Y613 1164 aa8.38□□□□□ -1.07
FNDC3B-208ENST00000476794 IGF2BP3O00425 579 aaKnown RBP eCLIP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 MEIS1O00470 390 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 PPP1R12AO14974 1030 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 KCNH1O95259 989 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 TNK2Q07912 1038 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 RNF43Q68DV7 783 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 CRACR2BQ8N4Y2 399 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 FEZ1Q99689 392 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 KRTAP9-9Q9BYP9 154 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 KRTAP9-4Q9BYQ2 154 aa8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 ASCC2Q9H1I8 757 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
FNDC3B-208ENST00000476794 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 PRODHO43272 600 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 SIGLEC6O43699 453 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 ZNF865P0CJ78 1059 aaPredicted RBP8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 GYS2P54840 703 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 NMIQ13287 307 aaPredicted RBP8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 DUSP27Q5VZP5 1158 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 POMZP3Q6PJE2 187 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 MFSD4AQ8N468 514 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 BTN2A2Q8WVV5 523 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 DHRS4Q9BTZ2 278 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 CHST7Q9NS84 486 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 CAPN6Q9Y6Q1 641 aa8.36□□□□□ -1.07
FNDC3B-208ENST00000476794 TRBV23-1A0A0A0MS06 115 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 SHISA3A0PJX4 238 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 VAMP4O75379 141 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 MED26O95402 600 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 PRAMEF1O95521 474 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 NFIAQ12857 509 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 RNF187Q5TA31 235 aaPredicted RBP8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 SYNPOQ8N3V7 929 aa8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 KISS1RQ969F8 398 aaPredicted RBP8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
FNDC3B-208ENST00000476794 CCDC163A0A0D9SF12 145 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 KIAA1324LA8MWY0 1029 aaPredicted RBP8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 H0Y8X5 98 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 CAPNS1P04632 268 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 FGFR1P11362 822 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 CBX2Q14781 532 aaPredicted RBP8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 CLEC16AQ2KHT3 1053 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 GTF2IRD2BQ6EKJ0 949 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 NSMFQ6X4W1 530 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 GTF2IRD2Q86UP8 949 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 SCUBE1Q8IWY4 988 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 FAM181AQ8N9Y4 354 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 PIWIL2Q8TC59 973 aaKnown RBP8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 DBNDD2Q9BQY9 259 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 IER2Q9BTL4 223 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 GOLGA2P5Q9HBQ8 144 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 PCMTD2Q9NV79 361 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 U3KQE9 123 aa8.34□□□□□ -1.07
FNDC3B-208ENST00000476794 GSC2O15499 205 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 PABPC1P11940 636 aaKnown RBP8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 ITIH2P19823 946 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 AMPD2Q01433 879 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 SF1Q15637 639 aaKnown RBP8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 DPY19L1Q2PZI1 675 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 FILIP1Q7Z7B0 1213 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 SHKBP1Q8TBC3 707 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
FNDC3B-208ENST00000476794 OXCT1P55809 520 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 GRB10Q13322 594 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 DALRD3Q5D0E6 543 aaKnown RBP8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 TAF7LQ5H9L4 462 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 CDKAL1Q5VV42 579 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
FNDC3B-208ENST00000476794 GPR55Q9Y2T6 319 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms