RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 FOCADQ5VW36 1801 aa12.13□□□□□ -0.47
SNX5-208ENST00000475716 MYH1P12882 1939 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 TLL1O43897 1013 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 DUSP11O75319 330 aaKnown RBP12.12□□□□□ -0.47
SNX5-208ENST00000475716 BCAR3O75815 825 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 C6orf222P0C671 652 aaPredicted RBP12.12□□□□□ -0.47
SNX5-208ENST00000475716 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 KRT40Q6A162 431 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
SNX5-208ENST00000475716 FAM126BQ8IXS8 530 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 CERS4Q9HA82 394 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 HCN4Q9Y3Q4 1203 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
SNX5-208ENST00000475716 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 VWA5AO00534 786 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 ERC2O15083 957 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 CTAGE5O15320 804 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 IGSF3O75054 1194 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 CD4P01730 458 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 CCL23P55773 120 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 VWCEQ96DN2 955 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
SNX5-208ENST00000475716 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 TRANK1O15050 2925 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
SNX5-208ENST00000475716 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 A0A0U1RQG5 324 aaPredicted RBP12.1□□□□□ -0.47
SNX5-208ENST00000475716 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
SNX5-208ENST00000475716 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 BEX3Q00994 111 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 POLA2Q14181 598 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 AAK1Q2M2I8 961 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 MAMDC4Q6UXC1 1216 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
SNX5-208ENST00000475716 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 PIEZO1Q92508 2521 aa12.1□□□□□ -0.47
SNX5-208ENST00000475716 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 EPOPA6NHQ4 379 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 TLR3O15455 904 aaKnown RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 EEF2P13639 858 aaKnown RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 PTGS1P23219 599 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 GJA9P57773 515 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 ICA1Q05084 483 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 DDX11Q96FC9 970 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 UPF3AQ9H1J1 476 aaKnown RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
SNX5-208ENST00000475716 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 GRIN2DO15399 1336 aa12.09□□□□□ -0.47
SNX5-208ENST00000475716 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.47
SNX5-208ENST00000475716 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 PRKAB2O43741 272 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 RAD21O60216 631 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 GPR37L1O60883 481 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 FAM83BQ5T0W9 1011 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
SNX5-208ENST00000475716 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 SCLYQ96I15 445 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 FGD4Q96M96 766 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 NUP88Q99567 741 aaPredicted RBP12.08□□□□□ -0.48
SNX5-208ENST00000475716 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
SNX5-208ENST00000475716 WNT8AQ9H1J5 351 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 MTIF3Q9H2K0 278 aaKnown RBP12.08□□□□□ -0.48
SNX5-208ENST00000475716 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
SNX5-208ENST00000475716 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
SNX5-208ENST00000475716 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
SNX5-208ENST00000475716 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.07□□□□□ -0.48
SNX5-208ENST00000475716 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
SNX5-208ENST00000475716 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
SNX5-208ENST00000475716 TRIM27P14373 513 aa12.07□□□□□ -0.48
SNX5-208ENST00000475716 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
SNX5-208ENST00000475716 CDK8P49336 464 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms