RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SLC25A27O95847 323 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 ACRP10323 421 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 RASA1P20936 1047 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 TTF1Q15361 905 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-223ENST00000473345 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-223ENST00000473345 PBX4Q9BYU1 374 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 ZNF576Q9H609 170 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 PAG1Q9NWQ8 432 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
MCF2L-223ENST00000473345 DIS3Q9Y2L1 958 aaKnown RBP11.61□□□□□ -0.55
MCF2L-223ENST00000473345 IGKV6D-41A0A0C4DH26 115 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-223ENST00000473345 NDUFB10O96000 172 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 TIMP1P01033 207 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 AKR1A1P14550 325 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 CSF2RAP15509 400 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 MAMDC4Q6UXC1 1216 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 RNF180Q86T96 592 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 ERC1Q8IUD2 1116 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 HAUS7Q99871 368 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 EPB41L4AQ9HCS5 686 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-223ENST00000473345 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-223ENST00000473345 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
MCF2L-223ENST00000473345 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 GSG1L2A8MUP6 293 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 ATP5JP18859 108 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 CNTN2Q02246 1040 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 KCTD2Q14681 263 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 SNRNP48Q6IEG0 339 aaKnown RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 FAM126BQ8IXS8 530 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 PPM1EQ8WY54 764 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 TIFAQ96CG3 184 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 TSEN34Q9BSV6 310 aaKnown RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 PRDM12Q9H4Q4 367 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 STARD7Q9NQZ5 370 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 SLC5A4Q9NY91 659 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
MCF2L-223ENST00000473345 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
MCF2L-223ENST00000473345 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 F5H6K3 240 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 ASGR1P07306 291 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 CST5P28325 142 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 CYP2C18P33260 490 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 BEX3Q00994 111 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 KLRC3Q07444 240 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 TSHZ3Q63HK5 1081 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 MFSD5Q6N075 450 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 ZNF365Q70YC5 407 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 KIF1BPQ96EK5 621 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 STRBPQ96SI9 672 aaKnown RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 ZBTB40Q9NUA8 1239 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-223ENST00000473345 MYH8P13535 1937 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 SYNGAP1Q96PV0 1343 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
MCF2L-223ENST00000473345 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 RAD21O60216 631 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
MCF2L-223ENST00000473345 CD4P01730 458 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 IFIT2P09913 472 aaKnown RBP11.57□□□□□ -0.56
MCF2L-223ENST00000473345 MYOGP15173 224 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 ACVR2BQ13705 512 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 CCDC144BQ3MJ40 725 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCF2L-223ENST00000473345 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 NECAB3Q96P71 396 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-223ENST00000473345 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
MCF2L-223ENST00000473345 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 TEX13BQ9BXU2 312 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 FAM184BQ9ULE4 1060 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 ZNF536O15090 1300 aa11.57□□□□□ -0.56
MCF2L-223ENST00000473345 LRRC37A2A6NM11 1700 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 PRDM1O75626 825 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 C6orf222P0C671 652 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-223ENST00000473345 COL9A1P20849 921 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 GJA9P57773 515 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
MCF2L-223ENST00000473345 CCDC85BQ15834 202 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-223ENST00000473345 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms