RNA–Protein interactions for RNA: ENST00000473095.1

CHCHD2-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

TSL 1 (best)

Gene CHCHD2, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-202ENST00000473095 TBX21Q9UL17 535 aa16.09■□□□□ 0.17
CHCHD2-202ENST00000473095 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
CHCHD2-202ENST00000473095 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
CHCHD2-202ENST00000473095 MCM3APO60318 1980 aa16.09■□□□□ 0.17
CHCHD2-202ENST00000473095 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 TIMP1P01033 207 aa16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 USP38Q8NB14 1042 aa16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
CHCHD2-202ENST00000473095 DUSP11O75319 330 aaKnown RBP16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 ATP5JP18859 108 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 CST5P28325 142 aaPredicted RBP16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 CDK7P50613 346 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 KCNA10Q16322 511 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 CTR9Q6PD62 1173 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 HAUS7Q99871 368 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■□□□ 12.7
CHCHD2-202ENST00000473095 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 ELP1O95163 1332 aa16.07■□□□□ 0.16
CHCHD2-202ENST00000473095 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 APBB1O00213 710 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 ATP2A1O14983 1001 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 CHGBP05060 677 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 TJAP1Q5JTD0 557 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 MFSD5Q6N075 450 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 C16orf59Q7L2K0 433 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 SIRT2Q8IXJ6 389 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 TIFAQ96CG3 184 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
CHCHD2-202ENST00000473095 MYADML2A6NDP7 307 aa16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 SNRNP48Q6IEG0 339 aaKnown RBP16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 UPF3AQ9H1J1 476 aaKnown RBP16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 NYAP2Q9P242 653 aa16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 NCOR1O75376 2440 aa16.05■□□□□ 0.16
CHCHD2-202ENST00000473095 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 ADCY6O43306 1168 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 RAD21O60216 631 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 HMMRO75330 724 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 RASA1P20936 1047 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 GLT1D1Q96MS3 346 aa16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 PUS7LQ9H0K6 701 aaKnown RBP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
CHCHD2-202ENST00000473095 F5H6K3 240 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 NDUFB10O96000 172 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 ASGR1P07306 291 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 GJA9P57773 515 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 KLRC3Q07444 240 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 FGD4Q96M96 766 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.03■□□□□ 0.16
CHCHD2-202ENST00000473095 ARVCFO00192 962 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 TNFRSF10AO00220 468 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 CTAGE5O15320 804 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 PBX2P40425 430 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 NKX3-2P78367 333 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 FAM126BQ8IXS8 530 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 ZBTB40Q9NUA8 1239 aa16.02■□□□□ 0.16
CHCHD2-202ENST00000473095 GBF1Q92538 1859 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 IGKV6D-41A0A0C4DH26 115 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 GRXCR1A8MXD5 290 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 ZBED4O75132 1171 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 CSF2RAP15509 400 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
CHCHD2-202ENST00000473095 ATXN2LQ8WWM7 1075 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms