RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 ZNF444Q8N0Y2 327 aaPredicted RBP9.72□□□□□ -0.85
FDPS-209ENST00000471117 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 CRACR2BQ8N4Y2 399 aaPredicted RBP9.72□□□□□ -0.85
FDPS-209ENST00000471117 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 DYNLL2Q96FJ2 89 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 UBAC1Q9BSL1 405 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 EHD4Q9H223 541 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 CPA4Q9UI42 421 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 SERPINB13Q9UIV8 391 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 ATRNL1Q5VV63 1379 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 DOCK3Q8IZD9 2030 aa9.72□□□□□ -0.85
FDPS-209ENST00000471117 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 CPLX1O14810 134 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 ELNP15502 786 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 CDK8P49336 464 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 PRKCZQ05513 592 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 SEC23AQ15436 765 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 FOXD4L6Q3SYB3 417 aaPredicted RBP9.71□□□□□ -0.86
FDPS-209ENST00000471117 FOXD4L3Q6VB84 417 aaPredicted RBP9.71□□□□□ -0.86
FDPS-209ENST00000471117 SYNE3Q6ZMZ3 975 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 FOXP4Q8IVH2 680 aaPredicted RBP9.71□□□□□ -0.86
FDPS-209ENST00000471117 DEFB129Q9H1M3 183 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 ATP6V1DQ9Y5K8 247 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 SLC12A7Q9Y666 1083 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 TNKSO95271 1327 aa9.71□□□□□ -0.86
FDPS-209ENST00000471117 CACNA1BQ00975 2339 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 DDTLA6NHG4 134 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 TSPY2A6NKD2 308 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 H3BQV1 296 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 USP2O75604 605 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 INHAP05111 366 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 RXRAP19793 462 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 IREB2P48200 963 aaKnown RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 FOSBP53539 338 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 GABPAQ06546 454 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 SKOR2Q2VWA4 1001 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 NBPF12Q5TAG4 269 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 CPLX2Q6PUV4 134 aaKnown RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 MICU3Q86XE3 530 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 CCDC144CPQ8IYA2 1237 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ANKRD13AQ8IZ07 590 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ENAHQ8N8S7 591 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 SLC44A5Q8NCS7 719 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ASB2Q96Q27 587 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ZSCAN10Q96SZ4 725 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 MYL10Q9BUA6 226 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 FAM217BQ9NTX9 383 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
FDPS-209ENST00000471117 GABRQQ9UN88 632 aa9.7□□□□□ -0.86
FDPS-209ENST00000471117 ADCY3O60266 1144 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 CDKL5O76039 1030 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 RASA1P20936 1047 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 CDC27P30260 824 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 GTF2A2P52657 109 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 TFAP4Q01664 338 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 NID2Q14112 1375 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 RASA3Q14644 834 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 RTN1Q16799 776 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 IFIT1BQ5T764 474 aaKnown RBP9.69□□□□□ -0.86
FDPS-209ENST00000471117 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 ZNF654Q8IZM8 581 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 CCDC17Q96LX7 622 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 TMEM39BQ9GZU3 492 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 HERC5Q9UII4 1024 aaKnown RBP9.69□□□□□ -0.86
FDPS-209ENST00000471117 MYH4Q9Y623 1939 aa9.69□□□□□ -0.86
FDPS-209ENST00000471117 NMT2O60551 498 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 SHMT1P34896 483 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 RCAN1P53805 252 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 RESTQ13127 1097 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 NTRK3Q16288 839 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 CERKLQ49MI3 558 aaPredicted RBP9.68□□□□□ -0.86
FDPS-209ENST00000471117 TMEM31Q5JXX7 168 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 C17orf99Q6UX52 265 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 CATIPQ7Z7H3 387 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 METTL16Q86W50 562 aaKnown RBP9.68□□□□□ -0.86
FDPS-209ENST00000471117 FANCBQ8NB91 859 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 NEDD1Q8NHV4 660 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 NUP133Q8WUM0 1156 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 ATXN2LQ8WWM7 1075 aaKnown RBP9.68□□□□□ -0.86
FDPS-209ENST00000471117 HOOK2Q96ED9 719 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 C11orf49Q9H6J7 331 aa9.68□□□□□ -0.86
FDPS-209ENST00000471117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.68□□□□□ -0.86
FDPS-209ENST00000471117 TCP11L1Q9NUJ3 509 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms