RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZSWIM5Q9P217 1185 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 CEP131Q9UPN4 1083 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 LUC7L2Q9Y383 392 aaKnown RBP15.41■□□□□ 0.06
NPHP4-207ENST00000470763 WNT7AO00755 349 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 IFNAR1P17181 557 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 GPTP24298 496 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 TRIM14Q14142 442 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 EARS2Q5JPH6 523 aaKnown RBP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 CENPHQ9H3R5 247 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 MYH10P35580 1976 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 KRT86O43790 486 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 KRT14P02533 472 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 RNF187Q5TA31 235 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 GIMAP7Q8NHV1 300 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 NELFBQ8WX92 580 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 WASF1Q92558 559 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■■■■ 28.7
NPHP4-207ENST00000470763 MYH13Q9UKX3 1938 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 STK36Q9NRP7 1315 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 TRIM49BA6NDI0 452 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 LRRC10BA6NIK2 292 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 MEFVO15553 781 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 SCP2P22307 547 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 PAK1Q13153 545 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 CCDC70Q6NSX1 233 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 DEFB132Q7Z7B7 95 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPHP4-207ENST00000470763 NUP133Q8WUM0 1156 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 EHD2Q9NZN4 543 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
NPHP4-207ENST00000470763 CLGNO14967 610 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 GUCY1A3Q02108 690 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 TSR1Q2NL82 804 aaKnown RBP15.39■□□□□ 0.05
NPHP4-207ENST00000470763 SGMS1Q86VZ5 419 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 EEF2KMTQ96G04 330 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 XDHP47989 1333 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 OPA1O60313 960 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 RTN1Q16799 776 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 B4GALNT4Q76KP1 1039 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
NPHP4-207ENST00000470763 CXCR5P32302 372 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 MCAMP43121 646 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 APBA1Q02410 837 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 AMOTL1Q8IY63 956 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-207ENST00000470763 MYH7P12883 1935 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 SPAG1Q07617 926 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 AGPAT5Q9NUQ2 364 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 TACC3Q9Y6A5 838 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 HSF2BPO75031 334 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
NPHP4-207ENST00000470763 ZNF174Q15697 407 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
NPHP4-207ENST00000470763 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.05
NPHP4-207ENST00000470763 FSBPO95073 299 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 ADD2P35612 726 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 KRT83P78385 493 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 ACTN3Q08043 901 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-207ENST00000470763 NNTQ13423 1086 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 ZIM3Q96PE6 472 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 DNAJC7Q99615 494 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
NPHP4-207ENST00000470763 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
NPHP4-207ENST00000470763 SEC24CP53992 1094 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 NAA35Q5VZE5 725 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 CREG2Q8IUH2 290 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 SHISA4Q96DD7 197 aa15.37■□□□□ 0.05
NPHP4-207ENST00000470763 RNPC3Q96LT9 517 aaKnown RBP15.37■□□□□ 0.05
NPHP4-207ENST00000470763 PRDM1O75626 825 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 IPO7O95373 1038 aaKnown RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 DEXIO95424 95 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 KLK7P49862 253 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 KIF1CO43896 1103 aaKnown RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 CIAO1O76071 339 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 SKOR1P84550 965 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 KRT26Q7Z3Y9 468 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 IRF2BP1Q8IU81 584 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 CRACR2BQ8N4Y2 399 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 MTRQ99707 1265 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 LSP1P33241 339 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 LIFRP42702 1097 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 PRCPP42785 496 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 NAP1L1P55209 391 aaKnown RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms