RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 SYNRGQ9UMZ2 1314 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 MYO5AQ9Y4I1 1855 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 A0A1W2PRG0 241 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 ARVCFO00192 962 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 ERC2O15083 957 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 IDH1O75874 414 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 PGK1P00558 417 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 DYNLL1P63167 89 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 SEPT2Q15019 361 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 FAM9BQ8IZU0 186 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 RIOK1Q9BRS2 568 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 SLC28A3Q9HAS3 691 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 IL23AQ9NPF7 189 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 PIH1D3Q9NQM4 214 aaKnown RBP8.24□□□□□ -1.09
SF3A3-205ENST00000470585 SYNPO2Q9UMS6 1093 aa8.24□□□□□ -1.09
SF3A3-205ENST00000470585 NAV1Q8NEY1 1877 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PRRC2BQ5JSZ5 2229 aaKnown RBP8.23□□□□□ -1.09
SF3A3-205ENST00000470585 MYH8P13535 1937 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PNMA6EA0A0J9YXQ4 647 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 VWA5AO00534 786 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 FDX1P10109 184 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 BMP1P13497 986 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 STAT3P40763 770 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PLCD1P51178 756 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 GJA9P57773 515 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ICA1Q05084 483 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PLS1Q14651 629 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 KCNA10Q16322 511 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PRAMEF19Q5SWL8 479 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ANO1Q5XXA6 986 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 C16orf59Q7L2K0 433 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ERC1Q8IUD2 1116 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 FAM126BQ8IXS8 530 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 RPUSD2Q8IZ73 545 aaKnown RBP8.23□□□□□ -1.09
SF3A3-205ENST00000470585 SLC43A3Q8NBI5 491 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ATG4CQ96DT6 458 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 TEX13BQ9BXU2 312 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ABHD16BQ9H3Z7 469 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PRDM12Q9H4Q4 367 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 KANSL2Q9H9L4 492 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ATP8A2Q9NTI2 1148 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
SF3A3-205ENST00000470585 ZNF214Q9UL59 606 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
SF3A3-205ENST00000470585 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 GPR37L1O60883 481 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 CD4P01730 458 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 FGBP02675 491 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 ATP8B2P98198 1209 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-205ENST00000470585 ADGRE1Q14246 886 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-205ENST00000470585 ZNF365Q70YC5 407 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 AMOTL1Q8IY63 956 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 MIGA1Q8NAN2 632 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 REPS2Q8NFH8 660 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 KCNH6Q9H252 994 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 MCM9Q9NXL9 1143 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 Q9Y3F1 56 aa8.22□□□□□ -1.09
SF3A3-205ENST00000470585 COL11A1P12107 1806 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-205ENST00000470585 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.1
SF3A3-205ENST00000470585 GTPBP6O43824 516 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-205ENST00000470585 SNAI1O95863 264 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-205ENST00000470585 ASGR1P07306 291 aa8.21□□□□□ -1.1
SF3A3-205ENST00000470585 CSF2RAP15509 400 aa8.21□□□□□ -1.1
SF3A3-205ENST00000470585 OAZ1P54368 228 aa8.21□□□□□ -1.1
SF3A3-205ENST00000470585 ACVR2BQ13705 512 aa8.21□□□□□ -1.1
SF3A3-205ENST00000470585 HSP90AB4PQ58FF6 505 aa8.21□□□□□ -1.1
SF3A3-205ENST00000470585 DCP1AQ9NPI6 582 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-205ENST00000470585 LOC102724159A0A0B4J2E5 919 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 ZEB2O60315 1214 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PGK2P07205 417 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 C6orf222P0C671 652 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-205ENST00000470585 SUPT20HL2P0C7V6 817 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 TRIM27P14373 513 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 IGFBP4P22692 258 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PBX2P40425 430 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PWP2Q15269 919 aaKnown RBP8.2□□□□□ -1.1
SF3A3-205ENST00000470585 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 C16orf86Q6ZW13 317 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 SIAH1Q8IUQ4 282 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
SF3A3-205ENST00000470585 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PHOSPHO2Q8TCD6 241 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 DDX11Q96FC9 970 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 HIPK3Q9H422 1215 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 SCUBE2Q9NQ36 999 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms