RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 SLF1Q9BQI6 1058 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 PPP1R9AQ9ULJ8 1098 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 ADAMTS5Q9UNA0 930 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 HABP4Q5JVS0 413 aaKnown RBP17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 BTNL9Q6UXG8 535 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 MB21D1Q8N884 522 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 SH3TC2Q8TF17 1288 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 COL11A1P12107 1806 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE1-203ENST00000470278 CPA1P15085 419 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 RCAN1P53805 252 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 POTEEQ6S8J3 1075 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 KCTD1Q719H9 257 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 PRPF38AQ8NAV1 312 aaKnown RBP17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 TRIM47Q96LD4 638 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 TCEANC2Q96MN5 208 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 FBXO28Q9NVF7 368 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 RABGAP1Q9Y3P9 1069 aa17.45■□□□□ 0.38
CDC42SE1-203ENST00000470278 NID2Q14112 1375 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CALM1P0DP23 149 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CALM2P0DP24 149 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CALM3P0DP25 149 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 FDX1P10109 184 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 GRM4Q14833 912 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 SLC9C1Q4G0N8 1177 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 CPA4Q9UI42 421 aa17.44■□□□□ 0.38
CDC42SE1-203ENST00000470278 PLXNB2O15031 1838 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 VWA5AO00534 786 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 EVCP57679 992 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 APOA5Q6Q788 366 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 Q6ZUG5 572 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 REPS2Q8NFH8 660 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 ATG4CQ96DT6 458 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 TBC1D32Q96NH3 1257 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 TXNRD2Q9NNW7 524 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
CDC42SE1-203ENST00000470278 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 ATP2A1O14983 1001 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 CNMDO75829 334 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 ERVK-9P63128 1117 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 ERVK-24P63145 666 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 FGD1P98174 961 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 MTFR1Q15390 333 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 KIFC2Q96AC6 838 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 KIF2CQ99661 725 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 MAD2L2Q9UI95 211 aa17.42■□□□□ 0.38
CDC42SE1-203ENST00000470278 ECM2O94769 699 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 KIF5BP33176 963 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 OAZ1P54368 228 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 TTBK2Q6IQ55 1244 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 UBE2Q1Q7Z7E8 422 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 GPRC5AQ8NFJ5 357 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 CTCFLQ8NI51 663 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 BRF1Q92994 677 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 BTBD7Q9P203 1132 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
CDC42SE1-203ENST00000470278 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 PAGR1Q9BTK6 254 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms