RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 IFIT3O14879 490 aaKnown RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 IDH1O75874 414 aaKnown RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 NNTQ13423 1086 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 ZNF174Q15697 407 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 TCP11X2Q5H9J9 407 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 CHADLQ6NUI6 762 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 APPBP2Q92624 585 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 MYO1AQ9UBC5 1043 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 PLEKHG1Q9ULL1 1385 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 C5P01031 1676 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 ZNF263O14978 683 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 CDKL5O76039 1030 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 ELF1P32519 619 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 CREG2Q8IUH2 290 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 CCDC13Q8IYE1 715 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 MS4A14Q96JA4 679 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 ZNF219Q9P2Y4 722 aaPredicted RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 SLC12A7Q9Y666 1083 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 LSP1P33241 339 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 AFDNP55196 1824 aaKnown RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 FAM228AQ86W67 206 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 PROCA1Q8NCQ7 364 aaPredicted RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 NELFBQ8WX92 580 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 CTAGE1Q96RT6 745 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 HAUS4Q9H6D7 363 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 ADAMTS3O15072 1205 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 TUBBP07437 444 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 RPSAP08865 295 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 HPDP32754 393 aaPredicted RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 NAP1L1P55209 391 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 TCIRG1Q13488 830 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 SYNE4Q8N205 404 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 KLC4Q9NSK0 619 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 TARSL2A2RTX5 802 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 ZNF233A6NK53 670 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 MCAMP43121 646 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 CARSP49589 748 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 SAFBQ15424 915 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM3-215ENST00000469717 OR8K1Q8NGG5 319 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 ZNF473Q8WTR7 871 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 CCDC51Q96ER9 411 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 CCDC43Q96MW1 224 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 SCLT1Q96NL6 688 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 PLIN2Q99541 437 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 PPANQ9NQ55 473 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 LUC7L2Q9Y383 392 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 DIP2AQ14689 1571 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 ITIH6Q6UXX5 1313 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 MOCS3O95396 460 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 CDC25CP30307 473 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 USP8P40818 1118 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 TUBB4BP68371 445 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 IFT81Q8WYA0 676 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 RUFY1Q96T51 708 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 SLC40A1Q9NP59 571 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 LIMA1Q9UHB6 759 aaKnown RBP8.88□□□□□ -0.99
TPM3-215ENST00000469717 ODF2LQ9ULJ1 636 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 NFU1Q9UMS0 254 aa8.88□□□□□ -0.99
TPM3-215ENST00000469717 B4DLN1 442 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 NEBLO76041 1014 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 FSBPO95073 299 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 PRCPP42785 496 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 CCDC40Q4G0X9 1142 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 RILPL1Q5EBL4 403 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 NAIF1Q69YI7 327 aaPredicted RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 SPATA4Q8NEY3 305 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 MIEF2Q96C03 454 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 FAXDC2Q96IV6 333 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 CEP126Q9P2H0 1117 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 DDX20Q9UHI6 824 aaKnown RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 PARP1P09874 1014 aaKnown RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 RDXP35241 583 aaKnown RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 HAUS3Q68CZ6 603 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 PRDM16Q9HAZ2 1276 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 PIH1D3Q9NQM4 214 aaKnown RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 RBM12Q9NTZ6 932 aaKnown RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 HAUS2Q9NVX0 235 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 RASSF10A6NK89 507 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 E7EVH7 732 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 SNAP23O00161 211 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 PRKAB2O43741 272 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 GLI1P08151 1106 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 IL2RBP14784 551 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 PAK1Q13153 545 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 NEDD9Q14511 834 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 TMC4Q7Z404 712 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 OR2W6PQ8NHA6 318 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms