RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 COA7Q96BR5 231 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 CEP95Q96GE4 821 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 DUOX1Q9NRD9 1551 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 KIF2AO00139 706 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 RPN1P04843 607 aaKnown RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 ERCC5P28715 1186 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 TECP42680 631 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 PMS1P54277 932 aaKnown RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 PDE4CQ08493 712 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 SPATA20Q8TB22 786 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 GSDMAQ96QA5 445 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 PLCH1Q4KWH8 1693 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 SEC31AO94979 1220 aaKnown RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 CCDC178Q5BJE1 867 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
MCF2L-221ENST00000469415 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
MCF2L-221ENST00000469415 SMCO2A6NFE2 343 aa20.14■□□□□ 0.82
MCF2L-221ENST00000469415 USP17L5A8MUK1 530 aa20.14■□□□□ 0.82
MCF2L-221ENST00000469415 TBX2Q13207 712 aaPredicted RBP20.14■□□□□ 0.82
MCF2L-221ENST00000469415 E2F4Q16254 413 aa20.14■□□□□ 0.82
MCF2L-221ENST00000469415 SBK1Q52WX2 424 aa20.14■□□□□ 0.82
MCF2L-221ENST00000469415 GGA1Q9UJY5 639 aa20.14■□□□□ 0.82
MCF2L-221ENST00000469415 A0A1B0GTH6 734 aa20.14■□□□□ 0.81
MCF2L-221ENST00000469415 FAM196BA6NMK8 535 aa20.14■□□□□ 0.81
MCF2L-221ENST00000469415 CALML3P27482 149 aa20.14■□□□□ 0.81
MCF2L-221ENST00000469415 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
MCF2L-221ENST00000469415 ZNF397Q8NF99 534 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-221ENST00000469415 DOCK2Q92608 1830 aa20.14■□□□□ 0.81
MCF2L-221ENST00000469415 TXKP42681 527 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 PAK1Q13153 545 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 ADD3Q9UEY8 706 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 MKRN1Q9UHC7 482 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 MYH6P13533 1939 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 BMP15O95972 392 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 CACNB3P54284 484 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 UBXN1Q04323 297 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 RC3H1Q5TC82 1133 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 APTXQ7Z2E3 356 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 PCP11498 1178 aaKnown RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 LRRC15Q8TF66 581 aa20.13■□□□□ 0.81
MCF2L-221ENST00000469415 RTFDC1Q9BY42 306 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-221ENST00000469415 STX10O60499 249 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 PARP1P09874 1014 aaKnown RBP20.12■□□□□ 0.81
MCF2L-221ENST00000469415 PCMTD1Q96MG8 357 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-221ENST00000469415 LEMD3Q9Y2U8 911 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 TRIM37O94972 964 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 SLC16A2P36021 539 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 GRM4Q14833 912 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 RGS22Q8NE09 1264 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 SLF1Q9BQI6 1058 aa20.12■□□□□ 0.81
MCF2L-221ENST00000469415 KCNJ18B7U540 433 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 GYPCP04921 128 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 LDHCP07864 332 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 KCNJ12Q14500 433 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 ZNF569Q5MCW4 686 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 SRRTQ9BXP5 876 aaKnown RBP20.11■□□□□ 0.81
MCF2L-221ENST00000469415 STXBP3O00186 592 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 GTPBP6O43824 516 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-221ENST00000469415 TXNRD1Q16881 649 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 SOGA3Q5TF21 947 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 L2HGDHQ9H9P8 463 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 DISC1Q9NRI5 854 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-221ENST00000469415 ZNF446Q9NWS9 450 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 TIAM2Q8IVF5 1701 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-221ENST00000469415 GSTO1P78417 241 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 NAALADL2Q58DX5 795 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 SEPT12Q8IYM1 358 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 C4orf32Q8N8J7 132 aa20.11■□□□□ 0.81
MCF2L-221ENST00000469415 CLCN6P51797 869 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 DYMQ7RTS9 669 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 SEC63Q9UGP8 760 aaKnown RBP20.1■□□□□ 0.81
MCF2L-221ENST00000469415 FLT1P17948 1338 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 G3V3G9 751 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 NKRFO15226 690 aaKnown RBP eCLIP20.1■□□□□ 0.81
MCF2L-221ENST00000469415 CCP110O43303 1012 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 CCDC175P0C221 793 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 PLCG1P19174 1290 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 KRT9P35527 623 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 COPB1P53618 953 aaKnown RBP20.1■□□□□ 0.81
MCF2L-221ENST00000469415 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 TBCKQ8TEA7 893 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 CHP1Q99653 195 aa20.1■□□□□ 0.81
MCF2L-221ENST00000469415 ARAP2Q8WZ64 1704 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 FCER1AP12319 257 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 GYS1P13807 737 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 ASIC1P78348 528 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 TCP10Q12799 353 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 DPP8Q6V1X1 898 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-221ENST00000469415 TRIM10Q9UDY6 481 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 CDKAL1Q5VV42 579 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms