RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 SLC4A3P48751 1232 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 PPIGQ13427 754 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■■□ 24.6
MRPL55-224ENST00000464148 C12orf60Q5U649 245 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 CLASRPQ8N2M8 674 aaKnown RBP16■□□□□ 0.15
MRPL55-224ENST00000464148 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
MRPL55-224ENST00000464148 KLHDC9Q8NEP7 349 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 TBX21Q9UL17 535 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
MRPL55-224ENST00000464148 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 USP17L21D6R901 530 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 SMIM22K7EJ46 135 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-224ENST00000464148 SNRNP48Q6IEG0 339 aaKnown RBP15.99■□□□□ 0.15
MRPL55-224ENST00000464148 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
MRPL55-224ENST00000464148 ATXN2LQ8WWM7 1075 aaKnown RBP15.99■□□□□ 0.15
MRPL55-224ENST00000464148 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 PBX4Q9BYU1 374 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.15
MRPL55-224ENST00000464148 PRDM12Q9H4Q4 367 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 CHD9Q3L8U1 2897 aa15.99■□□□□ 0.15
MRPL55-224ENST00000464148 ELP1O95163 1332 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 SYNGAP1Q96PV0 1343 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 GRXCR1A8MXD5 290 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 DUSP11O75319 330 aaKnown RBP15.98■□□□□ 0.15
MRPL55-224ENST00000464148 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-224ENST00000464148 PBX2P40425 430 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 TMEM240Q5SV17 173 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 PCSK9Q8NBP7 692 aaKnown RBP15.98■□□□□ 0.15
MRPL55-224ENST00000464148 REPS2Q8NFH8 660 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 THEGQ9P2T0 379 aa15.98■□□□□ 0.15
MRPL55-224ENST00000464148 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-224ENST00000464148 MYADML2A6NDP7 307 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 ASGR1P07306 291 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 ACRP10323 421 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 CSF2RAP15509 400 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 ADD2P35612 726 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 AKNAD1Q5T1N1 836 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-224ENST00000464148 PSRC1Q6PGN9 363 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-224ENST00000464148 MAMDC4Q6UXC1 1216 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 C16orf59Q7L2K0 433 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 IL27Q8NEV9 243 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-224ENST00000464148 PPP1R12CQ9BZL4 782 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 SLC4A4Q9Y6R1 1079 aa15.97■□□□□ 0.15
MRPL55-224ENST00000464148 A0A0U1RQG5 324 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-224ENST00000464148 TLR3O15455 904 aaKnown RBP15.96■□□□□ 0.15
MRPL55-224ENST00000464148 IGFBP4P22692 258 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 CDK7P50613 346 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 IRX5P78411 483 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-224ENST00000464148 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 CCDC85BQ15834 202 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-224ENST00000464148 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 ZNF365Q70YC5 407 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 CPXCR1Q8N123 301 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 ASB2Q96Q27 587 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 BOLA2Q9H3K6 86 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 MSRAQ9UJ68 235 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 RIPK3Q9Y572 518 aa15.96■□□□□ 0.15
MRPL55-224ENST00000464148 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 ARVCFO00192 962 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 ZBED4O75132 1171 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 CST5P28325 142 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-224ENST00000464148 MRPS5P82675 430 aaKnown RBP15.95■□□□□ 0.14
MRPL55-224ENST00000464148 RAB30Q15771 203 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 RASIP1Q5U651 963 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 CTR9Q6PD62 1173 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-224ENST00000464148 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 PRPF38AQ8NAV1 312 aaKnown RBP15.95■□□□□ 0.14
MRPL55-224ENST00000464148 ADAMTS19Q8TE59 1207 aa15.95■□□□□ 0.14
MRPL55-224ENST00000464148 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-224ENST00000464148 GJA9P57773 515 aa15.94■□□□□ 0.14
MRPL55-224ENST00000464148 MTIF3Q9H2K0 278 aaKnown RBP15.94■□□□□ 0.14
MRPL55-224ENST00000464148 ABHD16BQ9H3Z7 469 aa15.94■□□□□ 0.14
MRPL55-224ENST00000464148 MKNK2Q9HBH9 465 aa15.94■□□□□ 0.14
MRPL55-224ENST00000464148 F5H6K3 240 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 ADCY6O43306 1168 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 CYP2C18P33260 490 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 KLRC3Q07444 240 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 FAM126BQ8IXS8 530 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 STK11IPQ8N1F8 1099 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 PANK1Q8TE04 598 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 KIFC2Q96AC6 838 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 UHRF1Q96T88 793 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-224ENST00000464148 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.93■□□□□ 0.14
MRPL55-224ENST00000464148 UPF3AQ9H1J1 476 aaKnown RBP15.93■□□□□ 0.14
MRPL55-224ENST00000464148 SLC28A3Q9HAS3 691 aa15.93■□□□□ 0.14
MRPL55-224ENST00000464148 RAVER2Q9HCJ3 691 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms