RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 PARP1P09874 1014 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 NR1I3Q14994 352 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 TMEM139Q8IV31 216 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 ANKRD7Q92527 254 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 PP2D1A8MPX8 630 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 SYT10Q6XYQ8 523 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 DAGLBQ8NCG7 672 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 KLRG2A4D1S0 409 aaPredicted RBP23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 TEX33O43247 280 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 LZTS2Q9BRK4 669 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 CTNND2Q9UQB3 1225 aa23.09■■□□□ 1.29
TUBGCP3-204ENST00000464139 A0A1B0GTH6 734 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 KIF2AO00139 706 aaPredicted RBP23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 NAPAP54920 295 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 CT47A1Q5JQC4 288 aaPredicted RBP23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 DTHD1Q6ZMT9 781 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 APTXQ7Z2E3 356 aaKnown RBP23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 KRT27Q7Z3Y8 459 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 GTPBP6O43824 516 aaPredicted RBP23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 TXNRD1Q16881 649 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 RRAGBQ5VZM2 374 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 TC2NQ8N9U0 490 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 MXD3Q9BW11 206 aa23.08■■□□□ 1.29
TUBGCP3-204ENST00000464139 TXLNAP40222 546 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 GALNT17Q6IS24 598 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 PYM1Q9BRP8 204 aaKnown RBP23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 UBA5Q9GZZ9 404 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 USP17L5A8MUK1 530 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 STAT6P42226 847 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 PLIN2Q99541 437 aa23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 BAG1Q99933 345 aaPredicted RBP23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 ZNF215Q9UL58 517 aaPredicted RBP23.07■■□□□ 1.28
TUBGCP3-204ENST00000464139 CDKAL1Q5VV42 579 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 PIGSQ96S52 555 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 ZMYND12Q9H0C1 365 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 PDCL2Q8N4E4 241 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 CERS5Q8N5B7 392 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 RASSF8Q8NHQ8 419 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 DISC1Q9NRI5 854 aa23.06■■□□□ 1.28
TUBGCP3-204ENST00000464139 SMCO2A6NFE2 343 aa23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 RRP36Q96EU6 259 aaKnown RBP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 LTBP1Q14766 1721 aa23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 RPN1P04843 607 aaKnown RBP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 DOK7Q18PE1 504 aa23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 REXO1L1PQ8IX06 675 aa23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 DDX4Q9NQI0 724 aaKnown RBP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 MAPK8IP1Q9UQF2 711 aa23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 V9GYY5 206 aaPredicted RBP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 FRMPD2Q68DX3 1309 aaPredicted RBP23.05■■□□□ 1.28
TUBGCP3-204ENST00000464139 ARHGAP6O43182 974 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 EIF6P56537 245 aaKnown RBP23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 NAALADL2Q58DX5 795 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 CLEC10AQ8IUN9 316 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 COA1Q9GZY4 146 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 ADD3Q9UEY8 706 aaKnown RBP23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 LETM2Q2VYF4 491 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 ZC3H12CQ9C0D7 883 aaKnown RBP23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 SEC63Q9UGP8 760 aaKnown RBP23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 GDAQ9Y2T3 454 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 BRWD3Q6RI45 1802 aa23.04■■□□□ 1.28
TUBGCP3-204ENST00000464139 CCP110O43303 1012 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 SCNN1DP51172 638 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 SYCP1Q15431 976 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 TTF2Q9UNY4 1162 aaKnown RBP23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 LRRC37AA6NMS7 1700 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 AKR1B1P15121 316 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 UBA7P41226 1012 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 TMC4Q7Z404 712 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 C6orf50Q9HD87 102 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 PPP2R2CQ9Y2T4 447 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 ANKRD31Q8N7Z5 1873 aa23.03■■□□□ 1.28
TUBGCP3-204ENST00000464139 CCNT1O60563 726 aaKnown RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 SRGNP10124 158 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 PPP4R3BQ5MIZ7 849 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 ZNF658Q5TYW1 1059 aaPredicted RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 CCDC12Q8WUD4 166 aaPredicted RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 CPLX3Q8WVH0 158 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 DNAI1Q9UI46 699 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 NOVP48745 357 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 ETF1P62495 437 aaKnown RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 NONOQ15233 471 aaKnown RBP eCLIP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 TOGARAM2Q6ZUX3 1019 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 NELFBQ8WX92 580 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 MTMR4Q9NYA4 1195 aa23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 BIN2Q9UBW5 565 aaPredicted RBP23.02■■□□□ 1.28
TUBGCP3-204ENST00000464139 FOCADQ5VW36 1801 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 STX10O60499 249 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 PDHBP11177 359 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 CCT6AP40227 531 aaKnown RBP23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 PAK1Q13153 545 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 SOGA3Q5TF21 947 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 TRIM65Q6PJ69 517 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 KRT25Q7Z3Z0 450 aa23.01■■□□□ 1.27
TUBGCP3-204ENST00000464139 IGSF22Q8N9C0 903 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms