RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF658Q5TYW1 1059 aaPredicted RBP13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 WDR93Q6P2C0 686 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 PLIN2Q99541 437 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 MYO1AQ9UBC5 1043 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 MAGEB6P1A0A0J9YX57 407 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 MYH10P35580 1976 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 MYH1P12882 1939 aa13.2□□□□□ -0.3
PDZRN3-203ENST00000462146 ZNF34Q8IZ26 560 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 MB21D1Q8N884 522 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 MTA3Q9BTC8 594 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 PSMD14O00487 310 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 PRPF6O94906 941 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 GYG1P46976 350 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 EVA1CP58658 441 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 NLRP5P59047 1200 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 SPAG1Q07617 926 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 TRIM14Q14142 442 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 FAM47AQ5JRC9 791 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 BMP15O95972 392 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 IVLP07476 585 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 BRINP3Q76B58 766 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 OR8K1Q8NGG5 319 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 SAR1BQ9Y6B6 198 aa13.19□□□□□ -0.3
PDZRN3-203ENST00000462146 ABCA3Q99758 1704 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 B4DLN1 442 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 CHRNDQ07001 517 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 STAT6P42226 847 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 MRPS25P82663 173 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 C2orf54Q08AI8 447 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 ZNF507Q8TCN5 953 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
PDZRN3-203ENST00000462146 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 TUBB4BP68371 445 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 MED4Q9NPJ6 270 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 EIF3CLB5ME19 914 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 GGCXP38435 758 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 KIAA1328Q86T90 577 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 IQCA1Q86XH1 822 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 C4orf32Q8N8J7 132 aa13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 EIF3CQ99613 913 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-203ENST00000462146 MACROD2A1Z1Q3 448 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 SCG2P13521 617 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 USP17L21D6R901 530 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 H7C1D1 291 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 AGPSO00116 658 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 KLRC4O43908 158 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms