RNA–Protein interactions for RNA: ENST00000457749.6

ZNF28-204, Transcript of zinc finger protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF28, Length 4,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-204ENST00000457749 GOPCQ9HD26 462 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 TNKSO95271 1327 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 EN2P19622 333 aaPredicted RBP5.47□□□□□ -1.53
ZNF28-204ENST00000457749 HOXD10P28358 340 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 RTN1Q16799 776 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 TTBK2Q6IQ55 1244 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 STOX1Q6ZVD7 989 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 PHKBQ93100 1093 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 ZSWIM6Q9HCJ5 1215 aa5.47□□□□□ -1.53
ZNF28-204ENST00000457749 PDS5AQ29RF7 1337 aaKnown RBP5.46□□□□□ -1.53
ZNF28-204ENST00000457749 PTPDC1A2A3K4 754 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L15C9J2P7 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L13C9JLJ4 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L11C9JVI0 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L18D6R9N7 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L22D6RA61 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L17D6RBQ6 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L19D6RCP7 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L20D6RJB6 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 NDUFB10O96000 172 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP14P54578 494 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 USP17L24Q0WX57 530 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 TRIM32Q13049 653 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 MAP3K11Q16584 847 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 KIAA1755Q5JYT7 1200 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SNRNP48Q6IEG0 339 aaKnown RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 FERMT2Q96AC1 680 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 ZSCAN10Q96SZ4 725 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 PRDM10Q9NQV6 1147 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 TPCN1Q9ULQ1 816 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 V9GY48 417 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 XBP1P17861 261 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 GJB2P29033 226 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 GRK4P32298 578 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 COG2Q14746 738 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 CCL14Q16627 93 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 ME3Q16798 604 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 PPP1R13LQ8WUF5 828 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 CCDC17Q96LX7 622 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SH2B1Q9NRF2 756 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 CHMP5Q9NZZ3 219 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SWAP70Q9UH65 585 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 ZHX1Q9UKY1 873 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 NEDD4P46934 1319 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 A0A0G2JLL6 359 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 RBAK-RBAKDNI3L0D1 243 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 ERCC3P19447 782 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 CALML3P27482 149 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 KIF5BP33176 963 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SP4Q02446 784 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 SSRP1Q08945 709 aaKnown RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 CYB5R4Q7L1T6 521 aa5.46□□□□□ -1.54
ZNF28-204ENST00000457749 PRRT2Q7Z6L0 340 aaPredicted RBP5.46□□□□□ -1.54
ZNF28-204ENST00000457749 POTEFA5A3E0 1075 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 C19orf81C9J6K1 198 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 TTLL1O95922 423 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 CCNA1P78396 465 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 KCTD2Q14681 263 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 GPAT2Q6NUI2 795 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 PNMA1Q8ND90 353 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 TMEM87BQ96K49 555 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 SEC63Q9UGP8 760 aaKnown RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ZNF112Q9UJU3 913 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 JAK2O60674 1132 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 CDKL5O76039 1030 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ERVK-9P63128 1117 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ERVK-24P63145 666 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 UBXN2AP68543 259 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ZRSR1Q15695 479 aaKnown RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 C16orf86Q6ZW13 317 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 C8orf76Q96K31 380 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 NUDT12Q9BQG2 462 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 VCPKMTQ9H867 229 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ZBED4O75132 1171 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 BMP3P12645 472 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 PDCP20941 246 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 STAT3P40763 770 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 COL9A3Q14050 684 aaPredicted RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ANKRD23Q86SG2 305 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 ZNF654Q8IZM8 581 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 AGBL1Q96MI9 1066 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 PURBQ96QR8 312 aaKnown RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 TM6SF1Q9BZW5 370 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 TFIP11Q9UBB9 837 aaKnown RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 PARP1P09874 1014 aaKnown RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 CTGFP29279 349 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 NLRP5P59047 1200 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 FBXO46Q6PJ61 603 aaPredicted RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 HEATR3Q7Z4Q2 680 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 FCHSD1Q86WN1 690 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 LENG1Q96BZ8 264 aaPredicted RBP5.45□□□□□ -1.54
ZNF28-204ENST00000457749 GBP4Q96PP9 640 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 BTBD7Q9P203 1132 aa5.45□□□□□ -1.54
ZNF28-204ENST00000457749 KCNH4Q9UQ05 1017 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms