RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 NYAP2Q9P242 653 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 VCANP13611 3396 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 SNAI1O95863 264 aaPredicted RBP22.41■■□□□ 1.18
MSH6-206ENST00000455383 RASA1P20936 1047 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 FAAP100Q0VG06 881 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 CCSAPQ6IQ19 270 aaPredicted RBP22.41■■□□□ 1.18
MSH6-206ENST00000455383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.41■■□□□ 1.182e-7■■■■□ 25.1
MSH6-206ENST00000455383 MYLIPQ8WY64 445 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 CNPY2Q9Y2B0 182 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 RIPK3Q9Y572 518 aa22.41■■□□□ 1.18
MSH6-206ENST00000455383 SYNRGQ9UMZ2 1314 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 ATP2A1O14983 1001 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 PQBP1O60828 265 aaKnown RBP22.4■■□□□ 1.18
MSH6-206ENST00000455383 RAG1P15918 1043 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 ACLYP53396 1101 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 GIMAP6Q6P9H5 292 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 MIER1Q8N108 512 aa22.4■■□□□ 1.18
MSH6-206ENST00000455383 NUP88Q99567 741 aaPredicted RBP22.4■■□□□ 1.18
MSH6-206ENST00000455383 MOXD2PA6NHM9 499 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 GSG1L2A8MUP6 293 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 F5H6K3 240 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 NDUFB10O96000 172 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 KLRC3Q07444 240 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 SNRNP48Q6IEG0 339 aaKnown RBP22.39■■□□□ 1.17
MSH6-206ENST00000455383 ZNF467Q7Z7K2 595 aaPredicted RBP22.39■■□□□ 1.17
MSH6-206ENST00000455383 RNPC3Q96LT9 517 aaKnown RBP22.39■■□□□ 1.17
MSH6-206ENST00000455383 CHMP4BQ9H444 224 aaKnown RBP22.39■■□□□ 1.17
MSH6-206ENST00000455383 TMEM39AQ9NV64 488 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 FAM184BQ9ULE4 1060 aa22.39■■□□□ 1.17
MSH6-206ENST00000455383 IGKV6D-41A0A0C4DH26 115 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 RAD21O60216 631 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 CST5P28325 142 aaPredicted RBP22.38■■□□□ 1.17
MSH6-206ENST00000455383 FPGSQ05932 587 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 PRPF38AQ8NAV1 312 aaKnown RBP22.38■■□□□ 1.17
MSH6-206ENST00000455383 NUP133Q8WUM0 1156 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 LRRCC1Q9C099 1032 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 STARD7Q9NQZ5 370 aa22.38■■□□□ 1.17
MSH6-206ENST00000455383 DUSP11O75319 330 aaKnown RBP22.37■■□□□ 1.17
MSH6-206ENST00000455383 DDX11Q96FC9 970 aa22.37■■□□□ 1.17
MSH6-206ENST00000455383 FGD4Q96M96 766 aa22.37■■□□□ 1.17
MSH6-206ENST00000455383 SPTBN5Q9NRC6 3674 aaKnown RBP22.36■■□□□ 1.17
MSH6-206ENST00000455383 DCDC2CA8MYV0 355 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 KCNA10Q16322 511 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 MKL1Q969V6 931 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 MKNK2Q9HBH9 465 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 ECHDC1Q9NTX5 307 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 TBX21Q9UL17 535 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 SYNPO2Q9UMS6 1093 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 PRUNE2Q8WUY3 3088 aa22.36■■□□□ 1.17
MSH6-206ENST00000455383 ELP1O95163 1332 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.35■■□□□ 1.17
MSH6-206ENST00000455383 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.35■■□□□ 1.17
MSH6-206ENST00000455383 MYADML2A6NDP7 307 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 TIMP1P01033 207 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 FOSL2P15408 326 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 CDK7P50613 346 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 KBTBD3Q8NAB2 608 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 OSBP2Q969R2 916 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 SLC38A10Q9HBR0 1119 aa22.35■■□□□ 1.17
MSH6-206ENST00000455383 ZHX1Q9UKY1 873 aaPredicted RBP22.35■■□□□ 1.17
MSH6-206ENST00000455383 ADCY6O43306 1168 aa22.34■■□□□ 1.17
MSH6-206ENST00000455383 SMARCA5O60264 1052 aaPredicted RBP22.34■■□□□ 1.17
MSH6-206ENST00000455383 ZBED4O75132 1171 aa22.34■■□□□ 1.17
MSH6-206ENST00000455383 ACVR2BQ13705 512 aa22.34■■□□□ 1.17
MSH6-206ENST00000455383 APPBP2Q92624 585 aa22.34■■□□□ 1.17
MSH6-206ENST00000455383 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
MSH6-206ENST00000455383 EPB41L4AQ9HCS5 686 aaPredicted RBP22.34■■□□□ 1.17
MSH6-206ENST00000455383 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
MSH6-206ENST00000455383 CLIP2Q9UDT6 1046 aa22.34■■□□□ 1.17
MSH6-206ENST00000455383 MINDY4BA8MYZ0 360 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 GJA9P57773 515 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 NKX3-2P78367 333 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 IRX5P78411 483 aaPredicted RBP22.33■■□□□ 1.17
MSH6-206ENST00000455383 CPXCR1Q8N123 301 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 KATNBL1Q9H079 304 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 ABHD16BQ9H3Z7 469 aa22.33■■□□□ 1.17
MSH6-206ENST00000455383 RAVER2Q9HCJ3 691 aaKnown RBP22.33■■□□□ 1.17
MSH6-206ENST00000455383 DNAJB2P25686 324 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 OAZ1P54368 228 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 GRIN2CQ14957 1233 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 MFSD5Q6N075 450 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 STK11IPQ8N1F8 1099 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
MSH6-206ENST00000455383 GMCL1P1Q8NEA9 526 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 CHST13Q8NET6 341 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 CEP95Q96GE4 821 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 GLT1D1Q96MS3 346 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.32■■□□□ 1.16
MSH6-206ENST00000455383 MTMR4Q9NYA4 1195 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 FBXO40Q9UH90 709 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 FEM1BQ9UK73 627 aa22.32■■□□□ 1.16
MSH6-206ENST00000455383 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 CTAGE5O15320 804 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 RNF113AO15541 343 aaKnown RBP22.31■■□□□ 1.16
MSH6-206ENST00000455383 ASGR1P07306 291 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 CCDC144BQ3MJ40 725 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 RASIP1Q5U651 963 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 C16orf59Q7L2K0 433 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 KIFC2Q96AC6 838 aa22.31■■□□□ 1.16
MSH6-206ENST00000455383 PLIN4Q96Q06 1357 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms