RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 CHURC1Q8WUH1 139 aa18.47■□□□□ 0.55
ACTB-206ENST00000443528 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
ACTB-206ENST00000443528 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
ACTB-206ENST00000443528 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
ACTB-206ENST00000443528 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
ACTB-206ENST00000443528 SLC15A5A6NIM6 579 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 ZBED4O75132 1171 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 SLC25A27O95847 323 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 SOX10P56693 466 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
ACTB-206ENST00000443528 GRB14Q14449 540 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 CCDC96Q2M329 555 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 TTBK2Q6IQ55 1244 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
ACTB-206ENST00000443528 NCAPG2Q86XI2 1143 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
ACTB-206ENST00000443528 PNMA1Q8ND90 353 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 MROH8Q9H579 483 aa18.46■□□□□ 0.55
ACTB-206ENST00000443528 FRMPD2Q68DX3 1309 aaPredicted RBP18.46■□□□□ 0.55
ACTB-206ENST00000443528 MYCP01106 439 aaPredicted RBP18.45■□□□□ 0.54
ACTB-206ENST00000443528 XRCC5P13010 732 aaKnown RBP18.45■□□□□ 0.54
ACTB-206ENST00000443528 ANTXR2P58335 489 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 ZNF543Q08ER8 600 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 IKQ13123 557 aaPredicted RBP18.45■□□□□ 0.54
ACTB-206ENST00000443528 MAP2K5Q13163 448 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 MTFR1Q15390 333 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 KAT14Q9H8E8 782 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 RAVER2Q9HCJ3 691 aaKnown RBP18.45■□□□□ 0.54
ACTB-206ENST00000443528 GPCPD1Q9NPB8 672 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 PRR12Q9ULL5 1215 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 IVNS1ABPQ9Y6Y0 642 aa18.45■□□□□ 0.54
ACTB-206ENST00000443528 STRNO43815 780 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 INHAP05111 366 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 FDX1P10109 184 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 SLC16A2P36021 539 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 RGS2P41220 211 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 IFIT1BQ5T764 474 aaKnown RBP18.44■□□□□ 0.54
ACTB-206ENST00000443528 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
ACTB-206ENST00000443528 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 CPXCR1Q8N123 301 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 TRIB2Q92519 343 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 TEX13BQ9BXU2 312 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 BIN2Q9UBW5 565 aaPredicted RBP18.44■□□□□ 0.54
ACTB-206ENST00000443528 ZNF536O15090 1300 aa18.44■□□□□ 0.54
ACTB-206ENST00000443528 POTEFA5A3E0 1075 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 HOXC6P09630 235 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 ADORA2AP29274 412 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 OAZ1P54368 228 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 SNAP25P60880 206 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 TRIM32Q13049 653 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 CCL14Q16627 93 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 ABRAQ8N0Z2 381 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 APBA2Q99767 749 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 SENP2Q9HC62 589 aa18.43■□□□□ 0.54
ACTB-206ENST00000443528 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
ACTB-206ENST00000443528 IFIT3O14879 490 aaKnown RBP18.42■□□□□ 0.54
ACTB-206ENST00000443528 COBLO75128 1261 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 HMGCRP04035 888 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 COPB2P35606 906 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 UBXN2AP68543 259 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 SYDE2Q5VT97 1194 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 IGDCC4Q8TDY8 1250 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 FLRT1Q9NZU1 646 aa18.42■□□□□ 0.54
ACTB-206ENST00000443528 FCER1AP12319 257 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 CCL5P13501 91 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 SLC4A3P48751 1232 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 RGS19P49795 217 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 TSGA10IPQ3SY00 556 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
ACTB-206ENST00000443528 RNF20Q5VTR2 975 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 AGBL1Q96MI9 1066 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 UNC93B1Q9H1C4 597 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
ACTB-206ENST00000443528 ZNF236Q9UL36 1845 aa18.41■□□□□ 0.54
ACTB-206ENST00000443528 PRC1O43663 620 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 IGHA2P01877 340 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
ACTB-206ENST00000443528 WTAPQ15007 396 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 TMEM67Q5HYA8 995 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 DPP9Q86TI2 863 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 TRMT44Q8IYL2 757 aaKnown RBP18.4■□□□□ 0.54
ACTB-206ENST00000443528 MMP19Q99542 508 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 TMEM106CQ9BVX2 250 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 UBA5Q9GZZ9 404 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 CPVLQ9H3G5 476 aa18.4■□□□□ 0.54
ACTB-206ENST00000443528 GPHNQ9NQX3 736 aaPredicted RBP18.4■□□□□ 0.54
ACTB-206ENST00000443528 ERICH2A1L162 156 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 MCM5P33992 734 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.53
ACTB-206ENST00000443528 ADCK5Q3MIX3 580 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 ASPRV1Q53RT3 343 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.536e-19■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms