RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 VTI1AQ96AJ9 217 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 ZNF214Q9UL59 606 aaPredicted RBP16.91■□□□□ 0.3
LINC00642-202ENST00000442515 PIEZO1Q92508 2521 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 MYO9BQ13459 2157 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 VWA5AO00534 786 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 ADCY6O43306 1168 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 AKR1B1P15121 316 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 COPB2P35606 906 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 RABGGTBP53611 331 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 POLA2Q14181 598 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 TMEM31Q5JXX7 168 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
LINC00642-202ENST00000442515 OTOP2Q7RTS6 562 aa16.9■□□□□ 0.3
LINC00642-202ENST00000442515 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
LINC00642-202ENST00000442515 PCSK9Q8NBP7 692 aaKnown RBP16.9■□□□□ 0.3
LINC00642-202ENST00000442515 CCDC8Q9H0W5 538 aaPredicted RBP16.9■□□□□ 0.3
LINC00642-202ENST00000442515 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.29
LINC00642-202ENST00000442515 MAGEB6P1A0A0J9YX57 407 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 ERC2O15083 957 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 TLR3O15455 904 aaKnown RBP16.89■□□□□ 0.29
LINC00642-202ENST00000442515 FGBP02675 491 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 CYP2D6P10635 497 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 MYOGP15173 224 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
LINC00642-202ENST00000442515 REPS2Q8NFH8 660 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
LINC00642-202ENST00000442515 SWAP70Q9UH65 585 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.29
LINC00642-202ENST00000442515 TRANK1O15050 2925 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
LINC00642-202ENST00000442515 CD4P01730 458 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 MAMDC4Q6UXC1 1216 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 SDR42E1Q8WUS8 393 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
LINC00642-202ENST00000442515 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
LINC00642-202ENST00000442515 HIPK3Q9H422 1215 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 SPC25Q9HBM1 224 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
LINC00642-202ENST00000442515 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 UMODL1Q5DID0 1318 aa16.88■□□□□ 0.29
LINC00642-202ENST00000442515 TRIM27P14373 513 aa16.87■□□□□ 0.29
LINC00642-202ENST00000442515 GJA9P57773 515 aa16.87■□□□□ 0.29
LINC00642-202ENST00000442515 ACVR2BQ13705 512 aa16.87■□□□□ 0.29
LINC00642-202ENST00000442515 SSH3Q8TE77 659 aa16.87■□□□□ 0.29
LINC00642-202ENST00000442515 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 CCDC144BQ3MJ40 725 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 TEX13BQ9BXU2 312 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 C11orf16Q9NQ32 467 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
LINC00642-202ENST00000442515 PCDHA11Q9Y5I1 949 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 MTCH2Q9Y6C9 303 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
LINC00642-202ENST00000442515 CTAGE5O15320 804 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
LINC00642-202ENST00000442515 PDE6AP16499 860 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 CCL23P55773 120 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 FAM83BQ5T0W9 1011 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 SNRNP48Q6IEG0 339 aaKnown RBP16.85■□□□□ 0.29
LINC00642-202ENST00000442515 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
LINC00642-202ENST00000442515 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 RIPK3Q9Y572 518 aa16.85■□□□□ 0.29
LINC00642-202ENST00000442515 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
LINC00642-202ENST00000442515 FAM86C2PA6NEL3 165 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 RFXAPO00287 272 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
LINC00642-202ENST00000442515 RAD21O60216 631 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 BCAR3O75815 825 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 KHSRPQ92945 711 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00642-202ENST00000442515 FGD4Q96M96 766 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 ABHD16BQ9H3Z7 469 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 COG5Q9UP83 839 aa16.84■□□□□ 0.29
LINC00642-202ENST00000442515 ZBBXA8MT70 800 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 SMIM22K7EJ46 135 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 TLL1O43897 1013 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 GPR37L1O60883 481 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
LINC00642-202ENST00000442515 POU3F3P20264 500 aaPredicted RBP16.83■□□□□ 0.28
LINC00642-202ENST00000442515 BEX3Q00994 111 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 SLC9C2Q5TAH2 1124 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 ARMCX2Q7L311 632 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 CCDC17Q96LX7 622 aa16.83■□□□□ 0.28
LINC00642-202ENST00000442515 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
LINC00642-202ENST00000442515 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
LINC00642-202ENST00000442515 MUC6Q6W4X9 2439 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 PARP14Q460N5 1801 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 ZNF532Q9HCE3 1301 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 CA3P07451 260 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 NKX3-2P78367 333 aa16.82■□□□□ 0.28
LINC00642-202ENST00000442515 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms