RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC188-201ENST00000439765 E7EWF7 191 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 CCNA1P78396 465 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 KCTD1Q719H9 257 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
CCDC188-201ENST00000439765 MB21D1Q8N884 522 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 USP6NLQ92738 828 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 GMCL1Q96IK5 515 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.92
CCDC188-201ENST00000439765 TNKSO95271 1327 aa20.77■□□□□ 0.92
CCDC188-201ENST00000439765 VWA5AO00534 786 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 NT5C2P49902 561 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 IKQ13123 557 aaPredicted RBP20.76■□□□□ 0.91
CCDC188-201ENST00000439765 CCDC96Q2M329 555 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 KIFC2Q96AC6 838 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 ZSCAN10Q96SZ4 725 aaPredicted RBP20.76■□□□□ 0.91
CCDC188-201ENST00000439765 UBAC1Q9BSL1 405 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 HTATIP2Q9BUP3 242 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 SPATC1LQ9H0A9 340 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 RPTORQ8N122 1335 aa20.76■□□□□ 0.91
CCDC188-201ENST00000439765 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 SLC27A2O14975 620 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 CYP2B6P20813 491 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 TMEM132BQ14DG7 1078 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 MORN1Q5T089 497 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 MAP3K21Q5TCX8 1036 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 ENAHQ8N8S7 591 aaPredicted RBP20.75■□□□□ 0.91
CCDC188-201ENST00000439765 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
CCDC188-201ENST00000439765 PLXNA1Q9UIW2 1896 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 EIF5BO60841 1220 aaKnown RBP20.75■□□□□ 0.91
CCDC188-201ENST00000439765 SEC24BO95487 1268 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 STAT2P52630 851 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 PLEKHH3Q7Z736 793 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
CCDC188-201ENST00000439765 NCOA7Q8NI08 942 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 TTC14Q96N46 770 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
CCDC188-201ENST00000439765 FEM1BQ9UK73 627 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 ADAMTS5Q9UNA0 930 aa20.75■□□□□ 0.91
CCDC188-201ENST00000439765 FRMPD2Q68DX3 1309 aaPredicted RBP20.74■□□□□ 0.91
CCDC188-201ENST00000439765 MYH6P13533 1939 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 H0YGN5 161 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 RGS2P41220 211 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 TRIM32Q13049 653 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 NECTIN1Q15223 517 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 HABP4Q5JVS0 413 aaKnown RBP20.74■□□□□ 0.91
CCDC188-201ENST00000439765 DGKHQ86XP1 1220 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 PRPF38AQ8NAV1 312 aaKnown RBP20.74■□□□□ 0.91
CCDC188-201ENST00000439765 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
CCDC188-201ENST00000439765 TFRCP02786 760 aaKnown RBP20.73■□□□□ 0.91
CCDC188-201ENST00000439765 PDHBP11177 359 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 ERCC3P19447 782 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 CHST3Q7LGC8 479 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 ANKLE1Q8NAG6 615 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 DPF3Q92784 378 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 APBA2Q99767 749 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 KAT14Q9H8E8 782 aa20.73■□□□□ 0.91
CCDC188-201ENST00000439765 ZNF214Q9UL59 606 aaPredicted RBP20.73■□□□□ 0.91
CCDC188-201ENST00000439765 ZKSCAN1P17029 563 aaPredicted RBP20.72■□□□□ 0.91
CCDC188-201ENST00000439765 CCDC178Q5BJE1 867 aa20.72■□□□□ 0.91
CCDC188-201ENST00000439765 NCAPG2Q86XI2 1143 aa20.72■□□□□ 0.91
CCDC188-201ENST00000439765 PNMA1Q8ND90 353 aa20.72■□□□□ 0.91
CCDC188-201ENST00000439765 GPCPD1Q9NPB8 672 aa20.72■□□□□ 0.91
CCDC188-201ENST00000439765 IVNS1ABPQ9Y6Y0 642 aa20.72■□□□□ 0.91
CCDC188-201ENST00000439765 REC8O95072 547 aa20.71■□□□□ 0.91
CCDC188-201ENST00000439765 PRKAR2AP13861 404 aaKnown RBP20.71■□□□□ 0.91
CCDC188-201ENST00000439765 MAP2K5Q13163 448 aa20.71■□□□□ 0.91
CCDC188-201ENST00000439765 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
CCDC188-201ENST00000439765 FAM160B2Q86V87 743 aa20.71■□□□□ 0.91
CCDC188-201ENST00000439765 MB21D2Q8IYB1 491 aaPredicted RBP20.71■□□□□ 0.91
CCDC188-201ENST00000439765 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
CCDC188-201ENST00000439765 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
CCDC188-201ENST00000439765 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
CCDC188-201ENST00000439765 SLC16A2P36021 539 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 SLC4A3P48751 1232 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 ANTXR2P58335 489 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 COL9A3Q14050 684 aaPredicted RBP20.7■□□□□ 0.9
CCDC188-201ENST00000439765 SEC23AQ15436 765 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 RNF20Q5VTR2 975 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 SNRNP48Q6IEG0 339 aaKnown RBP20.7■□□□□ 0.9
CCDC188-201ENST00000439765 TTBK2Q6IQ55 1244 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 CHURC1Q8WUH1 139 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 SLC38A10Q9HBR0 1119 aa20.7■□□□□ 0.9
CCDC188-201ENST00000439765 SLC15A5A6NIM6 579 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
CCDC188-201ENST00000439765 HOXC6P09630 235 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 PTPREP23469 700 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 STAT3P40763 770 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 GRB14Q14449 540 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 RIOX2Q8IUF8 465 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 SHCBP1Q8NEM2 672 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 ANKS1AQ92625 1134 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 TEX13BQ9BXU2 312 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 RAVER2Q9HCJ3 691 aaKnown RBP20.69■□□□□ 0.9
CCDC188-201ENST00000439765 OGDHLQ9ULD0 1010 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 PRR12Q9ULL5 1215 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms