RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MROH8Q9H579 483 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 GJD2Q9UKL4 321 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 ZNF214Q9UL59 606 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-206ENST00000439717 GABRQQ9UN88 632 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-206ENST00000439717 STRNO43815 780 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 ERCC3P19447 782 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 HSPA4P34932 840 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 STAT3P40763 770 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 ANTXR2P58335 489 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 WTAPQ15007 396 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 SLAIN1Q8ND83 568 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
HSPG2-206ENST00000439717 SLC15A5A6NIM6 579 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 PRC1O43663 620 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
HSPG2-206ENST00000439717 PTPREP23469 700 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 SLC9C1Q4G0N8 1177 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 TMEM67Q5HYA8 995 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 MORN1Q5T089 497 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 RASGRP2Q7LDG7 609 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 CHST3Q7LGC8 479 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 RASEFQ8IZ41 740 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 ABRAQ8N0Z2 381 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 TMTC2Q8N394 836 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 IGDCC4Q8TDY8 1250 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-206ENST00000439717 WDR19Q8NEZ3 1342 aa13.83□□□□□ -0.2
HSPG2-206ENST00000439717 ADCY3O60266 1144 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 PARP1P09874 1014 aaKnown RBP13.82□□□□□ -0.2
HSPG2-206ENST00000439717 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
HSPG2-206ENST00000439717 GRK4P32298 578 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 RGS2P41220 211 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 GRB14Q14449 540 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 SYDE2Q5VT97 1194 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 SNRNP48Q6IEG0 339 aaKnown RBP13.82□□□□□ -0.2
HSPG2-206ENST00000439717 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
HSPG2-206ENST00000439717 USP6NLQ92738 828 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
HSPG2-206ENST00000439717 LIFRP42702 1097 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 DHX32Q7L7V1 743 aaKnown RBP13.81□□□□□ -0.2
HSPG2-206ENST00000439717 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 CPXCR1Q8N123 301 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
HSPG2-206ENST00000439717 LY9Q9HBG7 655 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 RAVER2Q9HCJ3 691 aaKnown RBP13.81□□□□□ -0.2
HSPG2-206ENST00000439717 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
HSPG2-206ENST00000439717 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
HSPG2-206ENST00000439717 HTTP42858 3142 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 SH2B2O14492 632 aaPredicted RBP13.8□□□□□ -0.2
HSPG2-206ENST00000439717 HOXC6P09630 235 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 FCER1AP12319 257 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 SLC16A2P36021 539 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
HSPG2-206ENST00000439717 TKFCQ3LXA3 575 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 ADCK5Q3MIX3 580 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.8□□□□□ -0.2
HSPG2-206ENST00000439717 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 APBA2Q99767 749 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
HSPG2-206ENST00000439717 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 ZNF236Q9UL36 1845 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
HSPG2-206ENST00000439717 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 DDAH1O94760 285 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 ICAM1P05362 532 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 GOLGA8HP0CJ92 632 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 CYP2B6P20813 491 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 PSMA5P28066 241 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 ADORA2AP29274 412 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 UBXN2AP68543 259 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 TROAPQ12815 778 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 KCTD2Q14681 263 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 GRM4Q14833 912 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 MMP19Q99542 508 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms