RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 NBPF4Q96M43 638 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 ALPK1Q96QP1 1244 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 ASCC2Q9H1I8 757 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 ADAMTS10Q9H324 1103 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 CHST7Q9NS84 486 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 SLAMF8Q9P0V8 285 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 FBXL21Q9UKT6 434 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 ZNF451Q9Y4E5 1061 aa5.72□□□□□ -1.49
TRAPPC13-204ENST00000438419 PAPLNO95428 1278 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 LTKP29376 864 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 CTSKP43235 329 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZNF445P59923 1031 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 NCAPHQ15003 741 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 FXNQ16595 210 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 GNPTABQ3T906 1256 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 SOGA3Q5TF21 947 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 LARP1BQ659C4 914 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 POU5F2Q8N7G0 328 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 HNRNPLLQ8WVV9 542 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 UBXN4Q92575 508 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 TRIM55Q9BYV6 548 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 PRR13Q9NZ81 148 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 EBF1Q9UH73 591 aa5.71□□□□□ -1.5
TRAPPC13-204ENST00000438419 KLF4O43474 513 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 CD247P20963 164 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 RBL2Q08999 1139 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 VHLLQ6RSH7 139 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 ATG4DQ86TL0 474 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 LINC00116Q8NCU8 138 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 FLAD1Q8NFF5 587 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 FOXP3Q9BZS1 431 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 SUSD2Q9UGT4 822 aa5.7□□□□□ -1.5
TRAPPC13-204ENST00000438419 TMEM82A0PJX8 343 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 MEIS1O00470 390 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 U2SURPO15042 1029 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZGLP1P0C6A0 271 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 GDNFP39905 211 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 ERVFC1P60507 584 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 RAB33AQ14088 237 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 FYB2Q5VWT5 728 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 RNF111Q6ZNA4 994 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 BRF1Q92994 677 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 HAUS7Q99871 368 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 G6PC3Q9BUM1 346 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 KLHL25Q9H0H3 589 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 SP110Q9HB58 689 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 TMEM59LQ9UK28 342 aa5.69□□□□□ -1.5
TRAPPC13-204ENST00000438419 CARMIL2Q6F5E8 1435 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 EPHX1P07099 455 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 SYPP08247 313 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 NAT2P11245 290 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 HK2P52789 917 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 KIAA1211LQ6NV74 962 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 CRTC3Q6UUV7 619 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZPBP2Q6X784 338 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 FAM178BQ8IXR5 827 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZNF513Q8N8E2 541 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 MICAL1Q8TDZ2 1067 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 TCFL5Q9UL49 500 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 FHOD1Q9Y613 1164 aa5.68□□□□□ -1.5
TRAPPC13-204ENST00000438419 H0Y8X5 98 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 DDAH1O94760 285 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 BMP8BP34820 402 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZNF143P52747 638 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 PCBP3P57721 371 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 DDR2Q16832 855 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 HEATR6Q6AI08 1181 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 C6orf15Q6UXA7 325 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 LINC01599Q8WXQ3 324 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 FGD4Q96M96 766 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 GBP3Q9H0R5 595 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 SIRPGQ9P1W8 387 aa5.67□□□□□ -1.5
TRAPPC13-204ENST00000438419 A0A087WZG4 1122 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 B2RBV5 119 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 ZNF205O95201 554 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 HPXP02790 462 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 ITGA4P13612 1032 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 VAV1P15498 845 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 JUNBP17275 347 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 CEBPAP49715 358 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 NOL9Q5SY16 702 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 FIBCD1Q8N539 461 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 CELF2-AS1Q8N7Q2 184 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 DNAJC2Q99543 621 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
TRAPPC13-204ENST00000438419 ANKRD34BA5PLL1 514 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 NOTOA8MTQ0 251 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 BIN1O00499 593 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 FKTNO75072 461 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 GJB6O95452 261 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 GSNP06396 782 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 RPL10P27635 214 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 TRHRP34981 398 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 AFMP43652 599 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 RTP2Q5QGT7 225 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 WAPLQ7Z5K2 1190 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms