RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ADCY1Q08828 1119 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 GAS6Q14393 721 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 ODF1Q14990 250 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 HIF1AQ16665 826 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 INAVAQ3KP66 663 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 KRT77Q7Z794 578 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 NLRP13Q86W25 1043 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 PMEPA1Q969W9 287 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 TTC17Q96AE7 1141 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 TNIP3Q96KP6 325 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 SLC52A2Q9HAB3 445 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 MBIPQ9NS73 344 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 NDOR1Q9UHB4 597 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 DIS3Q9Y2L1 958 aaKnown RBP6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 hCG_1642624A0A1W2PR95 340 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 ERC2O15083 957 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 DHX16O60231 1041 aaKnown RBP6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 OPA1O60313 960 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 ADAMTS2O95450 1211 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 JMJD7P0C870 316 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 MYBP10242 640 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 TGFB3P10600 412 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 BMP6P22004 513 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 ITPKAP23677 461 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 CYP2C19P33261 490 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 NRLP54845 237 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 TRIM61Q5EBN2 209 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 DACT2Q5SW24 774 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 OTOP3Q7RTS5 596 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 STK11IPQ8N1F8 1099 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 STK35Q8TDR2 534 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 SNRNP27Q8WVK2 155 aaKnown RBP6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 PGBD4Q96DM1 585 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 HHIPQ96QV1 700 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 RSAD1Q9HA92 442 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 NSFL1CQ9UNZ2 370 aaKnown RBP6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 DNM3Q9UQ16 869 aa6.44□□□□□ -1.38
HMGB3P10-201ENST00000434734 LTFP02788 710 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 C6orf222P0C671 652 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 CCND1P24385 295 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 GRIA2P42262 883 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 CDK8P49336 464 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 AK2P54819 239 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 ERVK-21P61565 698 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZBED6P86452 979 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 RBM10P98175 930 aaKnown RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 SV2CQ496J9 727 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 TMEM240Q5SV17 173 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZNF385CQ66K41 422 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 C1orf122Q6ZSJ8 110 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 SCUBE1Q8IWY4 988 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 GRIN3AQ8TCU5 1115 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 AIDAQ96BJ3 306 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 SCLYQ96I15 445 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 MYD88Q99836 296 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 AARSD1Q9BTE6 412 aaKnown RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 CRB3Q9BUF7 120 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 SLC13A1Q9BZW2 595 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 CSRNP2Q9H175 543 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 PGAP2Q9UHJ9 254 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 PHF24Q9UPV7 400 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 APOBEC2Q9Y235 224 aaKnown RBP6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
HMGB3P10-201ENST00000434734 A0A1W2PRQ8 180 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZNF891A8MT65 544 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 J3KRW8 73 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 RNF225M0QZC1 329 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 PHKA2P46019 1235 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 IREB2P48200 963 aaKnown RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 PPP2R2AP63151 447 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 SUMO1P63165 101 aaKnown RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 GTF2H3Q13889 308 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 PLA2G4EQ3MJ16 856 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 OVOS1Q6IE37 1185 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 FCHSD1Q86WN1 690 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 SLC41A1Q8IVJ1 513 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 CMTR2Q8IYT2 770 aaKnown RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 IL17REQ8NFR9 667 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 IPO9Q96P70 1041 aaKnown RBP6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 NELL2Q99435 816 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 OSMRQ99650 979 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 CRISPLD1Q9H336 500 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZNF576Q9H609 170 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 RIC8AQ9NPQ8 531 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 PTPN22Q9Y2R2 807 aa6.42□□□□□ -1.38
HMGB3P10-201ENST00000434734 PHF20L1A8MW92 1017 aa6.41□□□□□ -1.38
HMGB3P10-201ENST00000434734 PRODHO43272 600 aa6.41□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZEB2O60315 1214 aa6.41□□□□□ -1.38
HMGB3P10-201ENST00000434734 DNAJA2O60884 412 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms