RNA–Protein interactions for RNA: ENST00000429299.2

LTB-210, Transcript of lymphotoxin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTB, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-210ENST00000429299 SYNGAP1Q96PV0 1343 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 DUSP11O75319 330 aaKnown RBP23.35■■□□□ 1.33
LTB-210ENST00000429299 HSP90AB4PQ58FF6 505 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 C12orf60Q5U649 245 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 CEP85Q6P2H3 762 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 MAMDC4Q6UXC1 1216 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 CCDC129Q6ZRS4 1044 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 AMOTL1Q8IY63 956 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 PCSK9Q8NBP7 692 aaKnown RBP23.35■■□□□ 1.33
LTB-210ENST00000429299 REPS2Q8NFH8 660 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 ASB2Q96Q27 587 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 PBX4Q9BYU1 374 aa23.35■■□□□ 1.33
LTB-210ENST00000429299 PLXNA1Q9UIW2 1896 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 PARP14Q460N5 1801 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 GOLIM4O00461 696 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 SNAI1O95863 264 aaPredicted RBP23.34■■□□□ 1.33
LTB-210ENST00000429299 CST5P28325 142 aaPredicted RBP23.34■■□□□ 1.33
LTB-210ENST00000429299 TMEM199Q8N511 208 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 PPM1EQ8WY54 764 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 DDX11Q96FC9 970 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 ARMT1Q9H993 441 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 DDX19BQ9UMR2 479 aa23.34■■□□□ 1.33
LTB-210ENST00000429299 C16orf86Q6ZW13 317 aa23.33■■□□□ 1.33
LTB-210ENST00000429299 TEX13BQ9BXU2 312 aa23.33■■□□□ 1.33
LTB-210ENST00000429299 PRDM12Q9H4Q4 367 aa23.33■■□□□ 1.33
LTB-210ENST00000429299 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
LTB-210ENST00000429299 THEGQ9P2T0 379 aa23.33■■□□□ 1.33
LTB-210ENST00000429299 COL11A1P12107 1806 aaPredicted RBP23.33■■□□□ 1.32
LTB-210ENST00000429299 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 PRKAB2O43741 272 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 CSF2RAP15509 400 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 PBX2P40425 430 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 RRP1P56182 461 aaKnown RBP23.32■■□□□ 1.32
LTB-210ENST00000429299 MRPS5P82675 430 aaKnown RBP23.32■■□□□ 1.32
LTB-210ENST00000429299 FAM83BQ5T0W9 1011 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 ZNF467Q7Z7K2 595 aaPredicted RBP23.32■■□□□ 1.32
LTB-210ENST00000429299 RHPN1Q8TCX5 695 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 VTI1AQ96AJ9 217 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 DNAJC2Q99543 621 aaKnown RBP23.32■■□□□ 1.32
LTB-210ENST00000429299 SPC25Q9HBM1 224 aa23.32■■□□□ 1.32
LTB-210ENST00000429299 DNAJC25-GNG10A0A024R161 153 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 USP17L12C9JPN9 530 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 USP17L21D6R901 530 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 PSRC1Q6PGN9 363 aaPredicted RBP23.31■■□□□ 1.32
LTB-210ENST00000429299 ZNF365Q70YC5 407 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 CLASRPQ8N2M8 674 aaKnown RBP23.31■■□□□ 1.32
LTB-210ENST00000429299 DDRGK1Q96HY6 314 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 MSRAQ9UJ68 235 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 ZHX1Q9UKY1 873 aaPredicted RBP23.31■■□□□ 1.32
LTB-210ENST00000429299 MYH8P13535 1937 aa23.31■■□□□ 1.32
LTB-210ENST00000429299 A0A0U1RQG5 324 aaPredicted RBP23.3■■□□□ 1.32
LTB-210ENST00000429299 ARVCFO00192 962 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 RAD21O60216 631 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 MBD4O95243 580 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 ASGR1P07306 291 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 C6orf222P0C671 652 aaPredicted RBP23.3■■□□□ 1.32
LTB-210ENST00000429299 ACVR2BQ13705 512 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 ADAMTS19Q8TE59 1207 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 SLF1Q9BQI6 1058 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
LTB-210ENST00000429299 CYP2D7A0A087X1C5 515 aa23.29■■□□□ 1.32
LTB-210ENST00000429299 MYADML2A6NDP7 307 aa23.29■■□□□ 1.32
LTB-210ENST00000429299 TLR3O15455 904 aaKnown RBP23.29■■□□□ 1.32
LTB-210ENST00000429299 GJA9P57773 515 aa23.29■■□□□ 1.32
LTB-210ENST00000429299 RAB30Q15771 203 aa23.29■■□□□ 1.32
LTB-210ENST00000429299 SNRNP48Q6IEG0 339 aaKnown RBP23.29■■□□□ 1.32
LTB-210ENST00000429299 PRPF38AQ8NAV1 312 aaKnown RBP23.29■■□□□ 1.32
LTB-210ENST00000429299 UPF3AQ9H1J1 476 aaKnown RBP23.29■■□□□ 1.32
LTB-210ENST00000429299 ABHD16BQ9H3Z7 469 aa23.29■■□□□ 1.32
LTB-210ENST00000429299 SMIM22K7EJ46 135 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 ATP2A1O14983 1001 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 ACRP10323 421 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 ADD2P35612 726 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 GNASQ5JWF2 1037 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.28■■□□□ 1.32
LTB-210ENST00000429299 RIPK3Q9Y572 518 aa23.28■■□□□ 1.32
LTB-210ENST00000429299 IFIT2P09913 472 aaKnown RBP23.27■■□□□ 1.32
LTB-210ENST00000429299 ADGRE1Q14246 886 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 CCDC144BQ3MJ40 725 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 FAM126BQ8IXS8 530 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 HERVK_113Q902F9 699 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 KIF1BPQ96EK5 621 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 UHRF1Q96T88 793 aaPredicted RBP23.27■■□□□ 1.32
LTB-210ENST00000429299 MTIF3Q9H2K0 278 aaKnown RBP23.27■■□□□ 1.32
LTB-210ENST00000429299 IL23AQ9NPF7 189 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
LTB-210ENST00000429299 CHD7Q9P2D1 2997 aa23.27■■□□□ 1.32
LTB-210ENST00000429299 IGFBP4P22692 258 aa23.26■■□□□ 1.31
LTB-210ENST00000429299 CCDC85BQ15834 202 aaPredicted RBP23.26■■□□□ 1.31
LTB-210ENST00000429299 CTR9Q6PD62 1173 aa23.26■■□□□ 1.31
LTB-210ENST00000429299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
LTB-210ENST00000429299 IL27Q8NEV9 243 aa23.26■■□□□ 1.31
LTB-210ENST00000429299 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.26■■□□□ 1.31
LTB-210ENST00000429299 PPP1R12CQ9BZL4 782 aa23.26■■□□□ 1.31
LTB-210ENST00000429299 SLC28A3Q9HAS3 691 aa23.26■■□□□ 1.31
LTB-210ENST00000429299 BAZ2AQ9UIF9 1905 aaKnown RBP23.25■■□□□ 1.31
LTB-210ENST00000429299 ZBED4O75132 1171 aa23.25■■□□□ 1.31
LTB-210ENST00000429299 FGBP02675 491 aa23.25■■□□□ 1.31
LTB-210ENST00000429299 NKX3-2P78367 333 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms