RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 GTPBP6O43824 516 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-202ENST00000426778 IRX5P78411 483 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-202ENST00000426778 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 GSPT2Q8IYD1 628 aaKnown RBP16.19■□□□□ 0.18
ERCC3-202ENST00000426778 AGPAT5Q9NUQ2 364 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 CCDC151A5D8V7 595 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 B4DLN1 442 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 PFKFB3Q16875 520 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 MARCH10Q8NA82 808 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 NAA15Q9BXJ9 866 aaKnown RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 LIMA1Q9UHB6 759 aaKnown RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CYP26C1Q6V0L0 522 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 AK7Q96M32 723 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 UIMC1Q96RL1 719 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CTAGE15A4D2H0 777 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CTAGE8P0CG41 777 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 RCAN1P53805 252 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CYP27A1Q02318 531 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 GRIK5Q16478 980 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CTAGE6Q86UF2 777 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 TMTC1Q8IUR5 882 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CTAGE4Q8IX94 777 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-202ENST00000426778 KAT14Q9H8E8 782 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
ERCC3-202ENST00000426778 PLCH1Q4KWH8 1693 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 DDAH1O94760 285 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 NDUFA10O95299 355 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
ERCC3-202ENST00000426778 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 TTF2Q9UNY4 1162 aaKnown RBP16.17■□□□□ 0.18
ERCC3-202ENST00000426778 ZNF185O15231 689 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 C4orf32Q8N8J7 132 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 PNMA1Q8ND90 353 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
ERCC3-202ENST00000426778 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 MYO6Q9UM54 1294 aa16.17■□□□□ 0.18
ERCC3-202ENST00000426778 EP400Q96L91 3159 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 RCCD1A6NED2 376 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CALM1P0DP23 149 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CALM2P0DP24 149 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CALM3P0DP25 149 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 ANKRD20A12PQ8NF67 263 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 MACROD2A1Z1Q3 448 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-202ENST00000426778 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-202ENST00000426778 FCER1AP12319 257 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CAPN2P17655 700 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 UBA7P41226 1012 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 CCDC122Q5T0U0 273 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-202ENST00000426778 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
ERCC3-202ENST00000426778 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 CYTH3O43739 400 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 BMP15O95972 392 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 HERVK_113P62684 666 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 FKBP15Q5T1M5 1219 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 FOXR1Q6PIV2 292 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 MMS19Q96T76 1030 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 PSMB7Q99436 277 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 LACRTQ9GZZ8 138 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 BSDC1Q9NW68 430 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 LCMT1Q9UIC8 334 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 LUC7L2Q9Y383 392 aaKnown RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 VGLL3A8MV65 326 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 MAP2K7O14733 419 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 HIBADHP31937 336 aaKnown RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 BRD3Q15059 726 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms