RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TRIB2Q92519 343 aa26.27■■□□□ 1.8
PTCHD3P2-201ENST00000424937 ZSWIM5Q9P217 1185 aa26.27■■□□□ 1.8
PTCHD3P2-201ENST00000424937 RBM8AQ9Y5S9 174 aaKnown RBP26.27■■□□□ 1.8
PTCHD3P2-201ENST00000424937 BRCA2P51587 3418 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ZBED4O75132 1171 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CDC45O75419 566 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 SLC25A27O95847 323 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 XRCC5P13010 732 aaKnown RBP26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ZKSCAN1P17029 563 aaPredicted RBP26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 STAT3P40763 770 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CASC1Q6TDU7 716 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 FAM160B2Q86V87 743 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 RIOX2Q8IUF8 465 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CHURC1Q8WUH1 139 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TTC14Q96N46 770 aa26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 LSG1Q9H089 658 aaKnown RBP26.26■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TRDNQ13061 729 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CCL14Q16627 93 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CCDC178Q5BJE1 867 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 SNRNP48Q6IEG0 339 aaKnown RBP26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CPXCR1Q8N123 301 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ZSCAN10Q96SZ4 725 aaPredicted RBP26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TEX13BQ9BXU2 312 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 RNF208Q9H0X6 261 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 UNC93B1Q9H1C4 597 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 SLC38A10Q9HBR0 1119 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ANO2Q9NQ90 1003 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TAF6LQ9Y6J9 622 aa26.25■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TNKSO95271 1327 aa26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 FRMPD2Q68DX3 1309 aaPredicted RBP26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ADORA2AP29274 412 aa26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 MLLT1Q03111 559 aaPredicted RBP26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TRIM32Q13049 653 aa26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 DGKHQ86XP1 1220 aa26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 TRMT44Q8IYL2 757 aaKnown RBP26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 UBAC1Q9BSL1 405 aa26.24■■□□□ 1.79
PTCHD3P2-201ENST00000424937 STRNO43815 780 aa26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 PDHBP11177 359 aa26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 EN2P19622 333 aaPredicted RBP26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 COPB2P35606 906 aa26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 SLC4A3P48751 1232 aa26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ENAHQ8N8S7 591 aaPredicted RBP26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 RAVER2Q9HCJ3 691 aaKnown RBP26.23■■□□□ 1.79
PTCHD3P2-201ENST00000424937 MYH6P13533 1939 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 E7EWF7 191 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 PLA2G6O60733 806 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 FCER1AP12319 257 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 RALYLQ86SE5 291 aaKnown RBP26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 DPP9Q86TI2 863 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 MMP19Q99542 508 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 KAT14Q9H8E8 782 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 GPCPD1Q9NPB8 672 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 FRMPD3Q5JV73 1810 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 SMCHD1A6NHR9 2005 aa26.22■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ATP2A1O14983 1001 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 FDX1P10109 184 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 STOX1Q6ZVD7 989 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 CYB5R4Q7L1T6 521 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 ABRAQ8N0Z2 381 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 PNMA1Q8ND90 353 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 NPLOC4Q8TAT6 608 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 PRR12Q9ULL5 1215 aa26.21■■□□□ 1.79
PTCHD3P2-201ENST00000424937 GJB1P08034 283 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 HOXC6P09630 235 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 TTBK2Q6IQ55 1244 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 NCOA7Q8NI08 942 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 FLRT1Q9NZU1 646 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 RIPK3Q9Y572 518 aa26.2■■□□□ 1.78
PTCHD3P2-201ENST00000424937 PRKAR2AP13861 404 aaKnown RBP26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SLC16A2P36021 539 aa26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 OAZ1P54368 228 aa26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SNAP25P60880 206 aa26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 ZNF543Q08ER8 600 aa26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 KCTD2Q14681 263 aa26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.19■■□□□ 1.78
PTCHD3P2-201ENST00000424937 COBLO75128 1261 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SNHG28P0DPA3 235 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 IFIT1BQ5T764 474 aaKnown RBP26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SYDE2Q5VT97 1194 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 CCDC174Q6PII3 467 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 ANKS1AQ92625 1134 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SHISA4Q96DD7 197 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 HMX1Q9NP08 348 aaPredicted RBP26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 PAK6Q9NQU5 681 aaPredicted RBP26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SLC5A4Q9NY91 659 aa26.18■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SLC27A2O14975 620 aa26.17■■□□□ 1.78
PTCHD3P2-201ENST00000424937 MFSD14CQ5VZR4 134 aa26.17■■□□□ 1.78
PTCHD3P2-201ENST00000424937 BTNL9Q6UXG8 535 aa26.17■■□□□ 1.78
PTCHD3P2-201ENST00000424937 DEFB118Q96PH6 123 aa26.17■■□□□ 1.78
PTCHD3P2-201ENST00000424937 HOMER2Q9NSB8 354 aa26.17■■□□□ 1.78
PTCHD3P2-201ENST00000424937 ZNF536O15090 1300 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 RPTORQ8N122 1335 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 GJA8P48165 433 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 CACNB2Q08289 660 aaPredicted RBP26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 SEC23AQ15436 765 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 MAP3K21Q5TCX8 1036 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 CREB3L3Q68CJ9 461 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 U2AF1L4Q8WU68 220 aaKnown RBP26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 AGBL1Q96MI9 1066 aa26.16■■□□□ 1.78
PTCHD3P2-201ENST00000424937 MCM3APO60318 1980 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms