RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 GOLGA8BA8MQT2 603 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 PLA2G6O60733 806 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 TREML2Q5T2D2 321 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 GPAT2Q6NUI2 795 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 IFNL1Q8IU54 200 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 RBM28Q9NW13 759 aaKnown RBP16.84■□□□□ 0.29
SGCE-202ENST00000415788 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
SGCE-202ENST00000415788 NID2Q14112 1375 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 AOC2O75106 756 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 ALDH1A1P00352 501 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 PDIA3P30101 505 aaKnown RBP16.84■□□□□ 0.29
SGCE-202ENST00000415788 GNAQP50148 359 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
SGCE-202ENST00000415788 STAT2P52630 851 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 CATSPERGQ6ZRH7 1159 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 NUP88Q99567 741 aaPredicted RBP16.84■□□□□ 0.29
SGCE-202ENST00000415788 PTPN18Q99952 460 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 PTPRFP10586 1907 aa16.84■□□□□ 0.29
SGCE-202ENST00000415788 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
SGCE-202ENST00000415788 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 PDHXO00330 501 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
SGCE-202ENST00000415788 OSBPP22059 807 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 IRX3P78415 501 aaPredicted RBP16.83■□□□□ 0.28
SGCE-202ENST00000415788 KCTD1Q719H9 257 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 ZIC5Q96T25 663 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.28
SGCE-202ENST00000415788 TPCN1Q9ULQ1 816 aa16.83■□□□□ 0.28
SGCE-202ENST00000415788 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 FLOT1O75955 427 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 COG2Q14746 738 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 RTN1Q16799 776 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 GTF3C2Q8WUA4 911 aaPredicted RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 ZSCAN31Q96LW9 406 aaPredicted RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 PARK7Q99497 189 aaKnown RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 THSD7BQ9C0I4 1608 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 IGF2BP3O00425 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
SGCE-202ENST00000415788 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 SH2B1Q9NRF2 756 aaPredicted RBP16.82■□□□□ 0.28
SGCE-202ENST00000415788 HPS5Q9UPZ3 1129 aa16.82■□□□□ 0.28
SGCE-202ENST00000415788 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
SGCE-202ENST00000415788 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
SGCE-202ENST00000415788 RXRAP19793 462 aa16.81■□□□□ 0.28
SGCE-202ENST00000415788 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
SGCE-202ENST00000415788 MAP7D2Q96T17 732 aa16.81■□□□□ 0.28
SGCE-202ENST00000415788 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
SGCE-202ENST00000415788 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
SGCE-202ENST00000415788 PFKFB2O60825 505 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 FDX1P10109 184 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
SGCE-202ENST00000415788 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
SGCE-202ENST00000415788 DSG3P32926 999 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 ME3Q16798 604 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 RAB11FIP4Q86YS3 637 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 MB21D1Q8N884 522 aa16.8■□□□□ 0.28
SGCE-202ENST00000415788 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
SGCE-202ENST00000415788 TMTC3Q6ZXV5 915 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 SMCR8Q8TEV9 937 aaPredicted RBP16.79■□□□□ 0.28
SGCE-202ENST00000415788 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 SPZ1Q9BXG8 430 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
SGCE-202ENST00000415788 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 HERVK_113P62684 666 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 ZFYVE28Q9HCC9 887 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 FAM217BQ9NTX9 383 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 PRR12Q9ULL5 1215 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 CPLX1O14810 134 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 CA12O43570 354 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms