RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 TRIM43Q96BQ3 446 aaPredicted RBP18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 NYAP2Q9P242 653 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 CLIP2Q9UDT6 1046 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 F5H6K3 240 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 KLRC3Q07444 240 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 SBK1Q52WX2 424 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 GIMAP6Q6P9H5 292 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 ANKRD35Q8N283 1001 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 MAFAQ8NHW3 353 aaPredicted RBP18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 SEMA6BQ9H3T3 888 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
SBDSP1-201ENST00000415772 COL6A3P12111 3177 aa18.58■□□□□ 0.57
SBDSP1-201ENST00000415772 PLXNA1Q9UIW2 1896 aa18.58■□□□□ 0.57
SBDSP1-201ENST00000415772 SYNGAP1Q96PV0 1343 aa18.58■□□□□ 0.57
SBDSP1-201ENST00000415772 MOXD2PA6NHM9 499 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 ZFYP08048 801 aaPredicted RBP18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 ZNF865P0CJ78 1059 aaPredicted RBP18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 GNAT2P19087 354 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 RASA1P20936 1047 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 ACLYP53396 1101 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 APPBP2Q92624 585 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 GLT1D1Q96MS3 346 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 STRBPQ96SI9 672 aaKnown RBP18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 COL25A1Q9BXS0 654 aaPredicted RBP18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 FBXO40Q9UH90 709 aa18.58■□□□□ 0.56
SBDSP1-201ENST00000415772 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 ZNFX1Q9P2E3 1918 aaKnown RBP18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 MROH7Q68CQ1 1323 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 NDUFB10O96000 172 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 SLC3A2P08195 630 aaKnown RBP18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 C6orf222P0C671 652 aaPredicted RBP18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 FOSL2P15408 326 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 CCDC174Q6PII3 467 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 MYLIPQ8WY64 445 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 LENG1Q96BZ8 264 aaPredicted RBP18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 FEM1BQ9UK73 627 aa18.57■□□□□ 0.56
SBDSP1-201ENST00000415772 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 KIAA0355O15063 1070 aa18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 PCSK9Q8NBP7 692 aaKnown RBP18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 REPS2Q8NFH8 660 aa18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
SBDSP1-201ENST00000415772 GPAA1O43292 621 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 ADAMTS4O75173 837 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 TSPY3P0CV98 308 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 TSPY8P0CW00 308 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 PDE4BQ07343 736 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 ACVR2BQ13705 512 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 KCNA10Q16322 511 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
SBDSP1-201ENST00000415772 TMEM265A0A087WTH1 108 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 TLR3O15455 904 aaKnown RBP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 DUSP11O75319 330 aaKnown RBP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 PRDM1O75626 825 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 TTLL1O95922 423 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 CHST13Q8NET6 341 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 OSBP2Q969R2 916 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 TOX2Q96NM4 488 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 ABHD16BQ9H3Z7 469 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 HOMER2Q9NSB8 354 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 RIPK3Q9Y572 518 aa18.54■□□□□ 0.56
SBDSP1-201ENST00000415772 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 ATP2A1O14983 1001 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 SNAI1O95863 264 aaPredicted RBP18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 FDX1P10109 184 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 BMP3P12645 472 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 FAAP100Q0VG06 881 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 MAMDC4Q6UXC1 1216 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 CCDC129Q6ZRS4 1044 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 CEP95Q96GE4 821 aa18.53■□□□□ 0.56
SBDSP1-201ENST00000415772 ASGR1P07306 291 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 ITGB8P26012 769 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 OAZ1P54368 228 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 PPIGQ13427 754 aaKnown RBP eCLIP18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 CCDC144BQ3MJ40 725 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 SLFN13Q68D06 897 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 NAPBQ9H115 298 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 TTYH1Q9H313 450 aaPredicted RBP18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 SLC38A10Q9HBR0 1119 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 MTMR4Q9NYA4 1195 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 SYNPO2Q9UMS6 1093 aa18.52■□□□□ 0.56
SBDSP1-201ENST00000415772 ELP1O95163 1332 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 DNAJC25-GNG10A0A024R161 153 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms