RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
ZNF3-206ENST00000415068 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.04
ZNF3-206ENST00000415068 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.04
ZNF3-206ENST00000415068 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
ZNF3-206ENST00000415068 MYH15Q9Y2K3 1946 aa15.33■□□□□ 0.04
ZNF3-206ENST00000415068 FAM237AA0A1B0GTK4 181 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 POTECB2RU33 542 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 EPHX2P34913 555 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 USP14P54578 494 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 ATP2B2Q01814 1243 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 GNL2Q13823 731 aaKnown RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 SCYL3Q8IZE3 742 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 PIGSQ96S52 555 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 MAF1Q9H063 256 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 C6orf50Q9HD87 102 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 GPCPD1Q9NPB8 672 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 FEM1BQ9UK73 627 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
ZNF3-206ENST00000415068 BAZ2BQ9UIF8 2168 aaKnown RBP15.32■□□□□ 0.04
ZNF3-206ENST00000415068 SPTLC2O15270 562 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 SULF1Q8IWU6 871 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
ZNF3-206ENST00000415068 OXER1Q8TDS5 423 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
ZNF3-206ENST00000415068 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
ZNF3-206ENST00000415068 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 GDPD2Q9HCC8 539 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
ZNF3-206ENST00000415068 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
ZNF3-206ENST00000415068 hCG_1642624A0A1W2PR95 340 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 FIBPO43427 364 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 PTPRAP18433 802 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 CMA1P23946 247 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 ECE1P42892 770 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 NR5A1Q13285 461 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 SYDE2Q5VT97 1194 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 KCTD1Q719H9 257 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 WDR90Q96KV7 1748 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
ZNF3-206ENST00000415068 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
ZNF3-206ENST00000415068 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-206ENST00000415068 PPP1R12BO60237 982 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-206ENST00000415068 STAT2P52630 851 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 BACE1P56817 501 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 ZNF445P59923 1031 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 SF3A1Q15459 793 aaKnown RBP15.29■□□□□ 0.04
ZNF3-206ENST00000415068 CCDC96Q2M329 555 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 AXDND1Q5T1B0 1012 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-206ENST00000415068 KRT25Q7Z3Z0 450 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
ZNF3-206ENST00000415068 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 VAT1LQ9HCJ6 419 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 PCDHA6Q9UN73 950 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 PCDHA8Q9Y5H6 950 aa15.29■□□□□ 0.04
ZNF3-206ENST00000415068 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 TRIM75PA6NK02 468 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 PTPREP23469 700 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 INPP5BP32019 993 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
ZNF3-206ENST00000415068 FOSBP53539 338 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 NAPAP54920 295 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 STK38Q15208 465 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 ARL6IP4Q66PJ3 421 aaKnown RBP15.28■□□□□ 0.04
ZNF3-206ENST00000415068 HEATR3Q7Z4Q2 680 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 ELOA2Q8IYF1 753 aaPredicted RBP15.28■□□□□ 0.04
ZNF3-206ENST00000415068 PRPF38AQ8NAV1 312 aaKnown RBP15.28■□□□□ 0.04
ZNF3-206ENST00000415068 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 RANBP17Q9H2T7 1088 aaKnown RBP15.28■□□□□ 0.04
ZNF3-206ENST00000415068 CPVLQ9H3G5 476 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 PICK1Q9NRD5 415 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 PRR12Q9ULL5 1215 aa15.28■□□□□ 0.04
ZNF3-206ENST00000415068 SRPRBQ9Y5M8 271 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1575.4 ms