RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 PIGSQ96S52 555 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 ECE2O60344 883 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 TPM4P67936 248 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 SLC15A2Q16348 729 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 INF2Q27J81 1249 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 MED15Q96RN5 788 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 FANCLQ9NW38 375 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 GREB1LQ9C091 1923 aaPredicted RBP17.49■□□□□ 0.39
LRCH3-202ENST00000414675 E2F4Q16254 413 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 DACT2Q5SW24 774 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 NAPAP54920 295 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 STAMQ92783 540 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 ZDHHC15Q96MV8 337 aa17.49■□□□□ 0.39
LRCH3-202ENST00000414675 CDC25AP30304 524 aa17.48■□□□□ 0.39
LRCH3-202ENST00000414675 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
LRCH3-202ENST00000414675 RRP36Q96EU6 259 aaKnown RBP17.48■□□□□ 0.39
LRCH3-202ENST00000414675 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
LRCH3-202ENST00000414675 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
LRCH3-202ENST00000414675 CCZ1BP86790 482 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 CCZ1P86791 482 aaPredicted RBP17.47■□□□□ 0.39
LRCH3-202ENST00000414675 DPYDQ12882 1025 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 STRIP1Q5VSL9 837 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 ARL6IP4Q66PJ3 421 aaKnown RBP17.47■□□□□ 0.39
LRCH3-202ENST00000414675 TMC6Q7Z403 805 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 TRMT44Q8IYL2 757 aaKnown RBP17.47■□□□□ 0.39
LRCH3-202ENST00000414675 TRIML1Q8N9V2 468 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 DNAJC18Q9H819 358 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 SWAP70Q9UH65 585 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 SNHG28P0DPA3 235 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 AOC3Q16853 763 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 HSP90AA4PQ58FG1 418 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 MTRQ99707 1265 aa17.47■□□□□ 0.39
LRCH3-202ENST00000414675 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
LRCH3-202ENST00000414675 SMCO2A6NFE2 343 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 TCP10Q12799 353 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 SHROOM1Q2M3G4 852 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-202ENST00000414675 TTLL1O95922 423 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
LRCH3-202ENST00000414675 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.39
LRCH3-202ENST00000414675 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
LRCH3-202ENST00000414675 PP2D1A8MPX8 630 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
LRCH3-202ENST00000414675 PTPN21Q16825 1174 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 CNKSR1Q969H4 720 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 NFE2L3Q9Y4A8 694 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
LRCH3-202ENST00000414675 UBASH3AP57075 661 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 FKBP1AP62942 108 aaKnown RBP17.45■□□□□ 0.38
LRCH3-202ENST00000414675 ARMCX5Q6P1M9 558 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
LRCH3-202ENST00000414675 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 IMPACTQ9P2X3 320 aa17.45■□□□□ 0.38
LRCH3-202ENST00000414675 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 NEMFO60524 1076 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 SERPINC1P01008 464 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 SKILP12757 684 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 ZNF18P17022 549 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 TTBK2Q6IQ55 1244 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 SMYD4Q8IYR2 804 aaPredicted RBP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 ENOX1Q8TC92 643 aaKnown RBP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 COA7Q96BR5 231 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 EHD4Q9H223 541 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 ZNF543Q08ER8 600 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 KARSQ15046 597 aaKnown RBP17.44■□□□□ 0.38
LRCH3-202ENST00000414675 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 TMEM260Q9NX78 707 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
LRCH3-202ENST00000414675 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 GSDMDP57764 484 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
LRCH3-202ENST00000414675 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 CUL4BQ13620 913 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 DTHD1Q6ZMT9 781 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 KRT25Q7Z3Z0 450 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
LRCH3-202ENST00000414675 SAMSN1Q9NSI8 373 aaKnown RBP17.43■□□□□ 0.38
LRCH3-202ENST00000414675 BIN2Q9UBW5 565 aaPredicted RBP17.43■□□□□ 0.38
LRCH3-202ENST00000414675 USP27XA6NNY8 438 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms