RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MOGSQ13724 837 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 SPRYD7Q5W111 196 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 SLFN13Q68D06 897 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 SYNE3Q6ZMZ3 975 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 MS4A4AQ96JQ5 239 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 GOPCQ9HD26 462 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
DDB1-202ENST00000414411 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
DDB1-202ENST00000414411 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
DDB1-202ENST00000414411 ESPNB1AK53 854 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 RXRAP19793 462 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
DDB1-202ENST00000414411 HMGCS2P54868 508 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 UBE2HP62256 183 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 DGKZQ13574 1117 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 GRM4Q14833 912 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
DDB1-202ENST00000414411 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 RAB11FIP4Q86YS3 637 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 LPAR1Q92633 364 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 FEZ1Q99689 392 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 MAD2L2Q9UI95 211 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 PCNTO95613 3336 aa11.52□□□□□ -0.57
DDB1-202ENST00000414411 VPS37CA5D8V6 355 aaPredicted RBP11.51□□□□□ -0.57
DDB1-202ENST00000414411 GOLGA8BA8MQT2 603 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 FAM155AB1AL88 458 aaPredicted RBP11.51□□□□□ -0.57
DDB1-202ENST00000414411 DTNBO60941 627 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 PDCP20941 246 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 CDC27P30260 824 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 ZYXQ15942 572 aaKnown RBP11.51□□□□□ -0.57
DDB1-202ENST00000414411 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 SPICE1Q8N0Z3 855 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 GTF3C6Q969F1 213 aa11.51□□□□□ -0.57
DDB1-202ENST00000414411 ABT1Q9ULW3 272 aaKnown RBP11.51□□□□□ -0.57
DDB1-202ENST00000414411 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 FIBPO43427 364 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 VCAM1P19320 739 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 SLC1A4P43007 532 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 METAP2P50579 478 aaKnown RBP eCLIP11.5□□□□□ -0.576e-8■□□□□ 10.7
DDB1-202ENST00000414411 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 SCRN1Q12765 414 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 STK3Q13188 491 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 NTRK3Q16288 839 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 CCDC102AQ96A19 550 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 CEP350Q5VT06 3117 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 GOLGA8AA7E2F4 631 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 SLC10A3P09131 477 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 PARP1P09874 1014 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 GOLGA8HP0CJ92 632 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 BMP3P12645 472 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 CCT2P78371 535 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 FUT2Q10981 343 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 SLC35G1Q2M3R5 365 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 NUP88Q99567 741 aaPredicted RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
DDB1-202ENST00000414411 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
DDB1-202ENST00000414411 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
DDB1-202ENST00000414411 KLRF2D3W0D1 207 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 RAD21O60216 631 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 PLA2G6O60733 806 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 SMARCA1P28370 1054 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 KIF5BP33176 963 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 GTF2A2P52657 109 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 RTN1Q16799 776 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 TTBK2Q6IQ55 1244 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 CTCFLQ8NI51 663 aaPredicted RBP11.49□□□□□ -0.57
DDB1-202ENST00000414411 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
DDB1-202ENST00000414411 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 RLFQ13129 1914 aa11.49□□□□□ -0.57
DDB1-202ENST00000414411 PLEKHA8P1O95397 391 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 CTDNEP1O95476 244 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 CETPP11597 493 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms