RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RABGAP1Q9Y3P9 1069 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 SNX14Q9Y5W7 946 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 MYPNQ86TC9 1320 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 VWA5AO00534 786 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 PRC1O43663 620 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 REC8O95072 547 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 SNHG28P0DPA3 235 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 STAT2P52630 851 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 ZNF543Q08ER8 600 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 IKQ13123 557 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 WTAPQ15007 396 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 TMEM67Q5HYA8 995 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 IFIT1BQ5T764 474 aaKnown RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 WDR78Q5VTH9 848 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 RNF20Q5VTR2 975 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 FBXO46Q6PJ61 603 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 RAB11FIP4Q86YS3 637 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 CPXCR1Q8N123 301 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 IGDCC4Q8TDY8 1250 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 GTF3C2Q8WUA4 911 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 DCAF4Q8WV16 495 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 KCNB2Q92953 911 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 MYL10Q9BUA6 226 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 USP26Q9BXU7 913 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 SPATC1LQ9H0A9 340 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 HOXC10Q9NYD6 342 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 SRRDQ9UH36 339 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 FEM1BQ9UK73 627 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 ZNF214Q9UL59 606 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-202ENST00000412686 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 RIPK3Q9Y572 518 aa9.05□□□□□ -0.96
CPSF4-202ENST00000412686 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
CPSF4-202ENST00000412686 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
CPSF4-202ENST00000412686 ERCC3P19447 782 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 RXRAP19793 462 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 MCM5P33992 734 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 FLT3LGP49771 235 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 NT5C2P49902 561 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 NUBP1P53384 320 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 C8orf34Q49A92 452 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 CCDC174Q6PII3 467 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 GPR142Q7Z601 462 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 PRPF38AQ8NAV1 312 aaKnown RBP9.04□□□□□ -0.96
CPSF4-202ENST00000412686 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 ABHD8Q96I13 439 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 JAKMIP1Q96N16 626 aaKnown RBP9.04□□□□□ -0.96
CPSF4-202ENST00000412686 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 LY9Q9HBG7 655 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 SLC38A10Q9HBR0 1119 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 ZNF536O15090 1300 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
CPSF4-202ENST00000412686 ELNP15502 786 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 ZKSCAN1P17029 563 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-202ENST00000412686 CYP2B6P20813 491 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 CCNA1P78396 465 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 SLC35G1Q2M3R5 365 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 CCDC178Q5BJE1 867 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 SNRNP48Q6IEG0 339 aaKnown RBP9.03□□□□□ -0.96
CPSF4-202ENST00000412686 PLEKHH3Q7Z736 793 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 FAM160B2Q86V87 743 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 CCAR1Q8IX12 1150 aaKnown RBP9.03□□□□□ -0.96
CPSF4-202ENST00000412686 MB21D1Q8N884 522 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 NUP133Q8WUM0 1156 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 COA7Q96BR5 231 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 AGBL1Q96MI9 1066 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
CPSF4-202ENST00000412686 ERICH2A1L162 156 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 ZBED4O75132 1171 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 PTPREP23469 700 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 HOXD10P28358 340 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 MAPK4P31152 587 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 STAT3P40763 770 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 TROAPQ12815 778 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 TRIM32Q13049 653 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 GRM4Q14833 912 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 SART3Q15020 963 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 ARHGEF6Q15052 776 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 PKN2Q16513 984 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 CCL14Q16627 93 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 MORN1Q5T089 497 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 BTNL9Q6UXG8 535 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 NBPF11Q86T75 865 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 RIOX2Q8IUF8 465 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 ZNF654Q8IZM8 581 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 NPLOC4Q8TAT6 608 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 RAET1EQ8TD07 263 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 CHURC1Q8WUH1 139 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms